DRSC/TRiP Functional Genomics Resources

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Protein Alignment brv2 and Pkd2l2

DIOPT Version :9

Sequence 1:NP_648970.2 Gene:brv2 / 39932 FlyBaseID:FBgn0036712 Length:736 Species:Drosophila melanogaster
Sequence 2:XP_017173433.1 Gene:Pkd2l2 / 53871 MGIID:1858231 Length:623 Species:Mus musculus


Alignment Length:717 Identity:146/717 - (20%)
Similarity:262/717 - (36%) Gaps:202/717 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 ATWPQEDPPYRAEEGGPTMDH-IGYLKIRLRSLRSELLISEGHTNEMLNQKYKHIAGDLLLYGSY 135
            |||     .||..||  |..| :.|.:             |...|..|.        :||||..:
Mouse     4 ATW-----WYRGGEG--TSKHDLHYRR-------------EAEVNTTLE--------ELLLYFIF 40

  Fly   136 FIALMLMVVLQEDHTNYYNTNNMQRLFWDNTSV----TFGLSQVYFIYQVHSYMKITLVEAFYAQ 196
            .|.|.::.....:...||....|..||.| ||:    ......:..|.:...:|:..|::..|  
Mouse    41 LINLCILTFGMVNPHMYYLNKVMSSLFVD-TSLPDDERSSFRSIRSITEFWKFMEGPLIDGLY-- 102

  Fly   197 KTNGYEGWWAMEQWQKI-------------GVVRLRQMR---------PV------DCH------ 227
                ::.|:..:|...:             |:.|:||:|         |.      ||:      
Mouse   103 ----WDSWYGNKQLYSVKNSSRIYYENVLLGIPRVRQLRVRNNTCKVYPAFQSLVSDCYSKYTVE 163

  Fly   228 ------IGLGK-PEWDKKTYAPEWR-LPYHRMHYTEKFWRIYDPFVPAEFEPSFLNGLLLNYDHY 284
                  .||.: |||   |:.|..| .|:                                  |:
Mouse   164 NEDFSDFGLKRNPEW---THTPSSRTAPW----------------------------------HW 191

  Fly   285 GYLLNYPEVAGYVVLMMSTKINCLKQIEYLRDYSWLDKNTSALFIDLTMYNADANLFTLITLRVE 349
            |::..|.: .||:|.:..:|.....:...||..:|:.:.|.|:|||.::|||:.|||.:|.|..|
Mouse   192 GFVGVYRD-GGYIVTLSKSKSETKAKFVDLRLNNWISRGTRAVFIDFSLYNANVNLFCIIRLLAE 255

  Fly   350 NSPFGIQLPRVHVDSVSMLGNVETR----SNSEL---LILFVYTV----LVILFARGVFTKIWHH 403
            ....|..|......||.:|..|...    ::.|:   :.|||:.:    .|..|....|..:|: 
Mouse   256 FPATGGLLTSWQFYSVKLLRYVSYYDYFIASCEVIFCIFLFVFIIQELRKVNEFKSAYFRSVWN- 319

  Fly   404 PAAAHEAWTMVDLAIYILNVFLTVLAI----MRDIETDALL-QIIETATKGQYLDFQRPLRLHQM 463
                   |      :.:|.:.|..||:    ..::::..|| |:::..  ..|.||......|..
Mouse   320 -------W------LEMLLLLLCFLAVSFYAYCNMQSFLLLGQLLKNT--DSYPDFYFLAYWHIY 369

  Fly   464 LFIVKGFLVCITTLRLWKVLQFASVFQHFTQTLFSAWRAVASLGVIILVVLMAIGITLAVPNGNN 528
            ...|....:....::::|.:.|.......:.||....:.:....::..::..|......:..|:.
Mouse   370 YNNVIAITIFFAWIKIFKFISFNETMSQLSSTLSRCMKDIVGFAIMFFIIFSAYAQLGFLVFGSQ 434

  Fly   529 AVVFSHMVQSVVTCMWYSMGFNGDIHPADFFHGGRILGILLYLALVFLLAIILMNVFASVIYDYF 593
            ...||....|:.......:   ||.:.|.......|||.:.::..:|.:..:|:|:|.::|.|.:
Mouse   435 VDDFSTFQNSIFAQFRIVL---GDFNFAGIQQANWILGPIYFITFIFFVFFVLLNMFLAIINDTY 496

  Fly   594 NETSRILKEHS-------------NRSSITFLEFLHVEYA-----------DLFGDAFRCLRKTY 634
            :|   :..::|             .:|....||.|.::.|           ||   |.|..|..:
Mouse   497 SE---VKADYSIGRRPDFELGKIIQKSCFNVLEKLRLKKAQAKEEKKMQTTDL---AQRARRDGF 555

  Fly   635 ESRGHTVAENVELELNRRELIKFKRDLIKSPQELKRALLTEEQRSADYRLRGEKLFKLMAILNLQ 699
            :          |.|:...|.:|..::.::     |:...||.|  .||:...::.|:.:.:..::
Mouse   556 D----------ESEIQEAEQMKRWKERLE-----KKYYSTEIQ--DDYQPVTQQEFRELFLYAVE 603

  Fly   700 VE 701
            :|
Mouse   604 LE 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brv2NP_648970.2 PKD_channel 169..596 CDD:285288 95/484 (20%)
Pkd2l2XP_017173433.1 PKD_channel 78..499 CDD:369653 96/486 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3599
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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