DRSC/TRiP Functional Genomics Resources

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Protein Alignment brv2 and PKD2

DIOPT Version :10

Sequence 1:NP_648970.2 Gene:brv2 / 39932 FlyBaseID:FBgn0036712 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_000288.1 Gene:PKD2 / 5311 HGNCID:9009 Length:968 Species:Homo sapiens


Alignment Length:728 Identity:169/728 - (23%)
Similarity:280/728 - (38%) Gaps:143/728 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 QED--PPYRAEEGG--PTMDHIGY------------LKIRLRSLRSELLISEGHTNEMLNQKY-K 123
            :||  ||..:..||  |...|:..            |...||.|....|:.|..||   .:|| |
Human   157 REDQGPPCPSPVGGGDPLHRHLPLEGQPPRVAWAERLVRGLRGLWGTRLMEESSTN---REKYLK 218

  Fly   124 HIAGDLLLYGSYFIALMLMVVLQEDHTNYYNTNNMQRLFWDNTSVTFGLSQVYFIYQVHSYMKIT 188
            .:..:|:.|..:.|.|.::.........||.|..|.:||.|........:....:..:..:.|.|
Human   219 SVLRELVTYLLFLIVLCILTYGMMSSNVYYYTRMMSQLFLDTPVSKTEKTNFKTLSSMEDFWKFT 283

  Fly   189 ---LVEAFYAQKTNGYEGWWAMEQWQK---------------IGVVRLRQMR--------PVDCH 227
               |::..|          |.|:...:               :||.|:||:|        |.|..
Human   284 EGSLLDGLY----------WKMQPSNQTEADNRSFIFYENLLLGVPRIRQLRVRNGSCSIPQDLR 338

  Fly   228 IGLGKPEWDKKTYAPEWRLPYHRMHYTEKFWRIYDPFVPAEFEPSFLNGLLLNYDHYGYLLNYPE 292
            ..: |..:|..:.:.|.|.|:...:.|.  | ||.       ....|||    ..|:|.:..| .
Human   339 DEI-KECYDVYSVSSEDRAPFGPRNGTA--W-IYT-------SEKDLNG----SSHWGIIATY-S 387

  Fly   293 VAGYVVLMMSTKINCLKQIEYLRDYSWLDKNTSALFIDLTMYNADANLFTLITLRVENSPFGIQL 357
            .|||.:.:..|:.....|:..|:...|||:.|.|.|||.::|||:.|||.::.|.||....|..:
Human   388 GAGYYLDLSRTREETAAQVASLKKNVWLDRGTRATFIDFSVYNANINLFCVVRLLVEFPATGGVI 452

  Fly   358 PRVHVDSVSMLGNVET----RSNSELL---ILFVYTVLVILFARGVFTKIWHHPAAAHEAWTMVD 415
            |......:.::..|.|    .:..|::   .:|.|.|..||..|      .|........|..:|
Human   453 PSWQFQPLKLIRYVTTFDFFLAACEIIFCFFIFYYVVEEILEIR------IHKLHYFRSFWNCLD 511

  Fly   416 LAIYILNVFLTVLAIMRDIETDALLQIIETATKGQYLDFQRPLRLHQMLF-IVKGFLVCITTLRL 479
            :.|.:|:|....:.|.|....:.|||.:|  .:..:.:|:. |...|:.| .:....|....::|
Human   512 VVIVVLSVVAIGINIYRTSNVEVLLQFLE--DQNTFPNFEH-LAYWQIQFNNIAAVTVFFVWIKL 573

  Fly   480 WKVLQFASVFQHFTQTLFSAWRAVASLGVIILVVLMAIGITLAVPNGNNAVVFSHMVQSVVTCMW 544
            :|.:.|.......:.|:....:.:....::..::.:|......:..|.....||...:.:.|...
Human   574 FKFINFNRTMSQLSTTMSRCAKDLFGFAIMFFIIFLAYAQLAYLVFGTQVDDFSTFQECIFTQFR 638

  Fly   545 YSMGFNGDIHPADFFHGGRILGILLYLALVFLLAIILMNVFASVIYDYFNETSRILKEHSNRSSI 609
            ..:   |||:.|:.....|:||.:.:...||.:..||:|:|.::|.|.::|....|.:..     
Human   639 IIL---GDINFAEIEEANRVLGPIYFTTFVFFMFFILLNMFLAIINDTYSEVKSDLAQQK----- 695

  Fly   610 TFLEFLHVEYADLFGDAFRCLRKTYESRGHTVAENVELELNRRELI---------KFKRDLIKSP 665
                 ..:|.:||       :||.|    |.....::|:.|..:.|         |...|.::  
Human   696 -----AEMELSDL-------IRKGY----HKALVKLKLKKNTVDDISESLRQGGGKLNFDELR-- 742

  Fly   666 QELK---------RALLTEEQRSADYRLRGEKLFKLMAILNLQVEILERMVLGDKD-GKLPTPPA 720
            |:||         .|:.|:..:..|..|...:..::...|..:.|.|      |.| ..||.|.:
Human   743 QDLKGKGHTDAEIEAIFTKYDQDGDQELTEHEHQQMRDDLEKEREDL------DLDHSSLPRPMS 801

  Fly   721 SDSDP---DDMPE 730
            |.|.|   ||..|
Human   802 SRSFPRSLDDSEE 814

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brv2NP_648970.2 Polycystin_dom 171..368 CDD:466668 54/222 (24%)
PKD_channel 369..596 CDD:462341 50/234 (21%)
PKD2NP_000288.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 58..181 8/23 (35%)
Polycystin_dom 269..463 CDD:466668 54/219 (25%)
PKD_channel 464..687 CDD:462341 50/234 (21%)
Selectivity filter. /evidence=ECO:0000305|PubMed:28092368 641..643 0/4 (0%)
EFh_HEF <724..792 CDD:355006 14/75 (19%)
EF-hand motif 754..782 CDD:320075 4/27 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 764..831 16/57 (28%)
Linker. /evidence=ECO:0000305|PubMed:18694932 803..822 5/12 (42%)
Important for interaction with PACS1 and PACS2. /evidence=ECO:0000269|PubMed:15692563 810..821 3/5 (60%)
Fer4_24 834..868 CDD:436280
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 917..968
Blue background indicates that the domain is not in the aligned region.

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