DRSC/TRiP Functional Genomics Resources

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Protein Alignment brv2 and F27C1.11

DIOPT Version :10

Sequence 1:NP_648970.2 Gene:brv2 / 39932 FlyBaseID:FBgn0036712 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_001362170.1 Gene:F27C1.11 / 3565116 WormBaseID:WBGene00017858 Length:1271 Species:Caenorhabditis elegans


Alignment Length:362 Identity:69/362 - (19%)
Similarity:126/362 - (34%) Gaps:112/362 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 QEDPPYRAEEGGPTMDHIGYLKIRLRSLRSELLISEGHTNEMLNQKYKHIAGDLLLYGSYFIALM 140
            :|:.||| :.|....:.:|....::::......:.:.|...:..::.|.  .::|.|...||...
 Worm   504 EEEDPYR-DIGTAERERLGEAATKIQAAYKGYTVRKKHVQFLKEKERKE--QEILDYEKQFIHYT 565

  Fly   141 LMVVLQEDHTNYYNTNNMQRLFWDNTSVTFGL---SQVYFIYQVHSYMKITLVEAFYAQKTNGYE 202
            ..|:|..                     .|||   :.::|:....:...    |..|.|.    :
 Worm   566 FEVMLGN---------------------RFGLDFDTPLFFVLHGENGSS----EKIYTQA----D 601

  Fly   203 GW-------WAMEQW-------QKIGVVRLRQMRPVDCHIGLGKPEWDKKTY------------A 241
            .|       :..|.|       .|:||     :..:|  :|..:..:...|:            |
 Worm   602 DWLFLPSSCYDPESWILSSTRSLKLGV-----LTSID--VGHEQEGYGAGTFIDKIVITEDEKGA 659

  Fly   242 PEWRLPYHRMHYTEKFWRIYDPFVPAEFEPSFLNGLL---LNYDHYGYLLNYPEVA-GYVVLMMS 302
            .|.|    |.::..:.|          |:...::||:   :..:.:.||::..|.. |.|.....
 Worm   660 KECR----RFYFQVEKW----------FDSGQVDGLIVRNIKVNSFLYLVSSTERGEGVVERKKE 710

  Fly   303 TK---------INC--------LKQIEYLRDYSWL--DKNTSALFID---LTMYNAD-ANLFTLI 344
            ||         :|.        ||.|.| .|.:||  |....:|..|   :.....| .|:..|.
 Worm   711 TKGRWEFRLHTLNSDLGGTTSHLKIIGY-GDENWLADDIPNDSLLRDPSQVPRIQVDFGNIGRLQ 774

  Fly   345 TLRVENSPFGIQLPRVHVDSVSMLGNVETRSNSELLI 381
            .:|.|..|.|.| |..:::.|. ..:::||....|::
 Worm   775 KVRFEIQPAGDQ-PNYYLEYVE-AQDLDTRERCVLMV 809

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brv2NP_648970.2 Polycystin_dom 171..368 CDD:466668 51/252 (20%)
PKD_channel 369..596 CDD:462341 3/13 (23%)
F27C1.11NP_001362170.1 DCX 26..94 CDD:340456
PTZ00112 95..>410 CDD:240274
IQCD 514..550 CDD:467745 2/35 (6%)
PLAT 564..684 CDD:412108 26/169 (15%)
PLAT 713..823 CDD:238061 24/100 (24%)
Blue background indicates that the domain is not in the aligned region.

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