DRSC/TRiP Functional Genomics Resources

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Protein Alignment brv2 and Pkd2

DIOPT Version :9

Sequence 1:NP_648970.2 Gene:brv2 / 39932 FlyBaseID:FBgn0036712 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_609561.2 Gene:Pkd2 / 34651 FlyBaseID:FBgn0041195 Length:924 Species:Drosophila melanogaster


Alignment Length:777 Identity:155/777 - (19%)
Similarity:284/777 - (36%) Gaps:199/777 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 QSIDYATWPQEDPPYRAEEGGPTMDHIGYLKIRLRSLRSELLISEGHTNEMLNQKYKHIAGDLLL 131
            :|:..:|.|.....:||    |::            :.:..|.:...||.:|....:.:...|:.
  Fly   192 KSVGSSTPPSPSRGHRA----PSI------------IAASALQNRAKTNRILYTTDEEVREALVE 240

  Fly   132 YGSYFIALML--MVVLQEDHT-NYYNTNNMQRLFWDN-----TSVTFGLSQVYFIYQVHSYMK-- 186
            :..:.|.|:|  :|||...|| .:|..:.|::||.:.     .|||.|..::..:.....|:|  
  Fly   241 FSVFIIFLILTSLVVLSVRHTYMFYFNDTMKKLFTNREMVVAPSVTVGFEKLITVPDWWDYLKYN 305

  Fly   187 --------ITLVEAFYAQKTN-GYEGWWAMEQWQKIGVVRLRQMRPVDCHIGLGKPEWDKKTYAP 242
                    :|.::...|..|: ..||   .||..:.|..:..:..|.:. :|....|      ||
  Fly   306 FLVTLHGDLTFMDDAQANLTSMPPEG---SEQGSEQGSEQGSEQSPEEV-VGEAPEE------AP 360

  Fly   243 EW-RL---------PY-----HR------------------------------------MHYTEK 256
            |. ||         ||     ||                                    .|:.|.
  Fly   361 EMDRLQEDFKYNGNPYIDLRGHRRAKRQSGVDGNSEDGSEDVSGNYLKDDSDSIQANMSFHHLEG 425

  Fly   257 FWRIYDPF---------VPAEFEPSFLNGLLLNYDHYGY-------------------------- 286
            ...:|:..         :....|..::|...:.|.:..|                          
  Fly   426 RVFLYENLLLGPPRLRQIRVRKESCYVNDAFIRYFNTCYAAYSSGAEDRKPMHKGSPFRTMHDLD 490

  Fly   287 ------LLNYPEVAGYVVLMMSTKINCLKQIEYLRDYSWLDKNTSALFIDLTMYNADANLFTLIT 345
                  :|.:....||.|.:...|...:|.|..|:|..|||:.:....::..::|.:.::|..|.
  Fly   491 STPIWTVLAFYRTGGYTVNLDYDKDRNVKIINDLKDIHWLDRGSRLCLVEFNLFNENTDIFQSIK 555

  Fly   346 LRVENSPFGIQLPRVHVDSVSMLGNVETRSNSELLILFVYTVLVILFARGVFTKIWHHPAAAH-- 408
            |..|..|.|..:|:.|:.:|.|......||....:|...:.::||.:.....|:|.......:  
  Fly   556 LIAEIPPTGGVIPQAHLQTVKMYSFFTDRSMLMTVIYIFWYIMVIYYTIYEITEIRKSGIKIYFC 620

  Fly   409 EAWTMVDLAI----YILNVF-----LTVLAIMRDIETDALLQIIETATKGQYLDFQRPLRLHQML 464
            ....::|.||    |:..|:     ..|:::.....:|...|.::.      |.|...:.:..|.
  Fly   621 SMLNILDCAILLGCYLALVYNIWHSFKVMSLTARAHSDVTYQSLDV------LCFWNIIYVDMMA 679

  Fly   465 FIVKGFLVCITTLRLWKVLQFASVFQHFTQTLFSAWRAVASLGVIILVVLMA---IGITLAVPNG 526
            .:  .|||.|   :::|.:.|......||.||....:.:|...::..:|.:|   :|:.|.   |
  Fly   680 IL--AFLVWI---KIFKFISFNKTLVQFTTTLKRCSKDLAGFSLMFGIVFLAYAQLGLLLF---G 736

  Fly   527 NNAVVFSHMVQSVVTCMWYSMGFNGDIHPADFFH-----GGRILGILLYLALVFLLAIILMNVFA 586
            .....|.:.:.|::|.:...:|        ||.:     ..|:||.:.:|..:.|:..||:|:|.
  Fly   737 TKHPDFRNFITSILTMIRMILG--------DFQYNLIEQANRVLGPIYFLTYILLVFFILLNMFL 793

  Fly   587 SVIYDYFNET-SRILKEHSNRSSITFLEFLHVEYADLFGDAF---RCLRKTYESRGHTVAENVEL 647
            ::|.:.:|.. ..|.:..|:..|..        |..|.|..:   .|.||   .|.|..|...| 
  Fly   794 AIIMETYNTVKGEITQGRSHLGSYI--------YRKLSGMLYWITHCGRK---RRHHPQASETE- 846

  Fly   648 ELNRRELIKFKRDLIKSPQELKRALLTEEQRSADYRLRGEK--LFKLMAILNLQVEILERMV 707
            :.:....:....|   ...|:::.:...||:......:||.  :.:|...:.|..||||:::
  Fly   847 DKDAEHDVGAAHD---ETHEIRKNMTPAEQQYFKDIPQGENQDMVRLNNRVGLLEEILEKLI 905

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brv2NP_648970.2 PKD_channel 169..596 CDD:285288 105/548 (19%)
Pkd2NP_609561.2 PKD_channel 402..803 CDD:285288 81/422 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456385
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3599
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10877
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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