DRSC/TRiP Functional Genomics Resources

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Protein Alignment brv2 and brv3

DIOPT Version :9

Sequence 1:NP_648970.2 Gene:brv2 / 39932 FlyBaseID:FBgn0036712 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_001284831.1 Gene:brv3 / 31246 FlyBaseID:FBgn0040333 Length:750 Species:Drosophila melanogaster


Alignment Length:736 Identity:303/736 - (41%)
Similarity:465/736 - (63%) Gaps:29/736 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 FGVTTCVVMVCFVLVSIFSGFMHEPQRFKTMLVTIVLVFFFQYLILEPIRFFIQSIDYATWPQE- 77
            |.:|..:::.|.:.:::|:||.||..:||||||:||:|..||:||.:||:|.|.|||.|.||.. 
  Fly    11 FAITVGIIIGCMICIAVFAGFQHEDVKFKTMLVSIVIVLIFQFLIGDPIKFVILSIDRALWPPRI 75

  Fly    78 --DPPYRAEEGGPTMDHIGYLKIRLRSLRSELLISEGHTNEMLNQKYKHIAGDLLLYGSYFIALM 140
              .|....:|.....:...:||.||.:.|:.|:::..:.|..||.:||.||.||.:||.||:.||
  Fly    76 YIPPRCDKDEMDEKEERRDFLKQRLINKRANLMLTSRYRNYKLNDQYKMIAHDLFIYGPYFLCLM 140

  Fly   141 LMVVLQEDHTNYYNTNNMQRLFWDNTSVTFGLSQVYFIYQVHSYMKITLVEAFYAQKT-NGYEGW 204
            .:|::..|.|.|:||..:..||..|.:...||.:|||:.|:..:::.|||.||.:..| :|..||
  Fly   141 CLVLVTRDQTLYHNTRIITDLFMYNHTDYTGLQEVYFLNQLFDFIESTLVLAFNSNSTESGSPGW 205

  Fly   205 WAMEQWQKIGVVRLRQMRPVDCHIGLGKPEWDKKTYAPEWRLPYHRMHYTEKFWRIYDPFVPAEF 269
            ...||...:||:||||:|..:..:|||.|::....|.|:|:|||.::||::|:||||:|::|.:.
  Fly   206 AHAEQSVLLGVMRLRQLRVSNPQVGLGPPKFSDTYYMPDWQLPYRKLHYSDKYWRIYEPWIPIKM 270

  Fly   270 EPSFLNGLLLNYDHYGYLLNYPEVAGYVVLMMSTKINCLKQIEYLRDYSWLDKNTSALFIDLTMY 334
            ...||:.||:|:||.|.|.:|||:||||.|:..:..|.:|.|:||.:..||..||||:|||.|:|
  Fly   271 GFEFLDALLMNFDHVGSLNSYPELAGYVSLLARSAANSMKVIDYLSENHWLTLNTSAVFIDFTLY 335

  Fly   335 NADANLFTLITLRVENSPFGIQLPRVHVDSVSMLGNVETRSNSELLILFVYTVLVILFARGVFTK 399
            |.|.|||::.|||||.:|||..:|.|.|||..:|.||:....:.||.|.:|.::.|.||:.:..|
  Fly   336 NVDVNLFSICTLRVEKTPFGGIVPDVQVDSAKLLENVDQMPYTGLLALLIYVLVFIQFAQTLAVK 400

  Fly   400 IWHHPAAAHEAWTMVDLAIYILNVFLTVLAIMRDIETDALLQIIETATKGQYLDFQRPLRLHQML 464
            :|:.|......|..:||.|:::||.:.||.::|:....::::.:|.|:|.:::||:||.|:||:.
  Fly   401 LWYEPHLLKSVWNKLDLFIFMVNVLVVVLVVLRESLVASMMKKVEGASKMEFIDFRRPSRMHQLT 465

  Fly   465 FIVKGFLVCITTLRLWKVLQFASVFQHFTQTLFSAWRAVASLGVIILVVLMAIGITLAVPNGNNA 529
            .|..|||:||||||||:||||||||:.||:||:.||.||||..:.|::.|:.....:...|||.:
  Fly   466 TITIGFLICITTLRLWRVLQFASVFKLFTRTLYLAWSAVASTAIAIVIFLIGFCFAVVTINGNYS 530

  Fly   530 VVFSHMVQSVVTCMWYSMGFNGDIHPADFFHGGRILGILLYLALVFLLAIILMNVFASVIYDYFN 594
            ..|:.:|:|:|.||.||.||:..:.|::.||||:.||||.|..|.|::.::|:|||.|:|.|||.
  Fly   531 SNFNKLVKSMVMCMCYSFGFSAQVKPSELFHGGKWLGILCYGVLAFVIIVLLINVFVSLINDYFT 595

  Fly   595 ETSRILKEHSNRSSITFLEFLHVEYADLFGDAFR---CLRKTYESRGHTVAENVELEL---NRRE 653
             .::.:::....:.|||.|||.||::.:.| .||   |.|:.|...|.||||||..:|   :|:.
  Fly   596 -VAKTIRDSERENRITFFEFLVVEFSGVLG-RFRKLPCWRRNYVRNGRTVAENVSRKLDSMDRQR 658

  Fly   654 LIKFK----RDLIKSPQELKRALLTEEQRSADYRLRGEKLFKLMAILNLQVEILERMVLGDKDGK 714
            |::.:    |..:..|...:.|||       :|:.||:|:..:..|||:|:.:: ||.|.|:..:
  Fly   659 LMRRRLRQGRHHVSRPVSAEDALL-------EYKDRGDKMVNVHYILNIQLTLI-RMFLFDEYVE 715

  Fly   715 LP-----TPPASDSDPDDMPE 730
            .|     .|.|.|.||:..|:
  Fly   716 WPQEQQKQPEAQDPDPNLGPD 736

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brv2NP_648970.2 PKD_channel 169..596 CDD:285288 192/427 (45%)
brv3NP_001284831.1 PKD_channel 170..595 CDD:285288 191/424 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445323
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3599
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S9099
OMA 1 1.010 - - QHG46093
OrthoDB 1 1.010 - - D1276906at2759
OrthoFinder 1 1.000 - - FOG0016837
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10877
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
87.810

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