DRSC/TRiP Functional Genomics Resources

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Protein Alignment brv2 and PKD1L1

DIOPT Version :9

Sequence 1:NP_648970.2 Gene:brv2 / 39932 FlyBaseID:FBgn0036712 Length:736 Species:Drosophila melanogaster
Sequence 2:XP_016867287.1 Gene:PKD1L1 / 168507 HGNCID:18053 Length:2920 Species:Homo sapiens


Alignment Length:690 Identity:142/690 - (20%)
Similarity:248/690 - (35%) Gaps:183/690 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 KIRLRSLRSELLISEGHTNEMLNQKYKHIAGDLLLYGSYFIALMLMVVLQEDHTNYYNTNN-MQR 160
            |.:||..|..:. .|..|...|    :.|:.|:|:     :.|:|.|:......:.|:.|. :::
Human  2323 KAQLRGTRQRMR-RESRTRAAL----RDISMDILM-----LLLLLCVIYGRFSQDEYSLNQAIRK 2377

  Fly   161 LFWDNTSVTFGLSQVYFIYQVHSYMKITLVEAFY-----AQKTNGYEGWWAMEQWQKIGVVRLRQ 220
            .|..|.....|  .:..|.....:...||::..|     :.:..|.:......:...||...:||
Human  2378 EFTRNARNCLG--GLRNIADWWDWSLTTLLDGLYPGGTPSARVPGAQPGALGGKCYLIGSSVIRQ 2440

  Fly   221 MRPVDCHIGLGKP--------EWDKKTYAPEWRLPYHRMHYTEKFWRIYDPFVPAEFEPSFLNGL 277
            ::....|  |.||        |....|.:||...|.                          |..
Human  2441 LKVFPRH--LCKPPRPFSALIEDSIPTCSPEVGGPE--------------------------NPY 2477

  Fly   278 LLNYDHYGYLLNYPEVAG----YVVLMMSTKINCLKQIEYLRDYSWLDKNTSALFIDLTMYNADA 338
            |::.::....||.|...|    .|:.:..|:......:..||...|:|::|.|:.:..|:||...
Human  2478 LIDPENQNVTLNGPGGCGTREDCVLSLGRTRTEAHTALSRLRASMWIDRSTRAVSVHFTLYNPPT 2542

  Fly   339 NLFTLITLRVENSPFGIQLPRVHVDSVSMLGNVETRSNSELLILFVYTVLVIL------------ 391
            .|||.::||||..|.|..:|...|:|.|:.     ||:|.|....:...||.|            
Human  2543 QLFTSVSLRVEILPTGSLVPSSLVESFSIF-----RSDSALQYHLMLPQLVFLALSLIHLCVQLY 2602

  Fly   392 --FARGVFTKIWHHPAAAHEAWTMVDLAIYILNVFLTVLAIMRDIET---DALLQIIETATKGQY 451
              ..:||.: .|..|    ..|    |.:.::.|.||..|:...:.|   |...|......:. :
Human  2603 RMMDKGVLS-YWRKP----RNW----LELSVVGVSLTYYAVSGHLVTLAGDVTNQFHRGLCRA-F 2657

  Fly   452 LDFQRPLRLHQMLFIVKGFLVCITTLRLW-------KVLQFASVFQHFTQTLFSAWRAVASL-GV 508
            :|.......:|....::|.|:.:.||:..       .:...:|:.:|...::|     ||.| |.
Human  2658 MDLTLMASWNQRARWLRGILLFLFTLKCVYLPGIQNTMASCSSMMRHSLPSIF-----VAGLVGA 2717

  Fly   509 IILVVLMAIGITLAVPNGNNAVVFSHMVQSVVTCMW-YSMGFNGDIHPADFFHGGR------ILG 566
            ::|..|                  ||:.:.::: || ...|...|..|...||..|      :||
Human  2718 LMLAAL------------------SHLHRFLLS-MWVLPPGTFTDAFPGLLFHFPRRSQKDCLLG 2763

  Fly   567 ILLYLALVFLLAIILMNVFASVIYDYFNETSRILKEHSNRSSITFLEFLHVEYADL-FGDAFRCL 630
                                             |.:...|:...:...|.:..|.| ||.....|
Human  2764 ---------------------------------LSKSDQRAMACYFGILLIVSATLCFGMLRGFL 2795

  Fly   631 ------RKTYESRGHTVAENVELELNRRELIKFKRDLIKSPQELKRALLTEEQRSADY------R 683
                  ||:::|:.....::|...: ..:::.|.|  :::| :|:.|.:.|..   :|      .
Human  2796 MTLPQKRKSFQSKSFVRLKDVTAYM-WEKVLTFLR--LETP-KLEEAEMVENH---NYYLDEFAN 2853

  Fly   684 LRGEKLFKLMAIL-NLQVEILERMVLGDKDGKLPTPPASD 722
            |..|.|.|:..:. :||:.:||:......:.:....|..|
Human  2854 LLDELLMKINGLSDSLQLPLLEKTSNNTGEARTEESPLVD 2893

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brv2NP_648970.2 PKD_channel 169..596 CDD:285288 96/475 (20%)
PKD1L1XP_016867287.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3599
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S9099
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1276906at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.770

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