DRSC/TRiP Functional Genomics Resources

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Protein Alignment brv2 and LOXHD1

DIOPT Version :10

Sequence 1:NP_648970.2 Gene:brv2 / 39932 FlyBaseID:FBgn0036712 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_001371403.1 Gene:LOXHD1 / 125336 HGNCID:26521 Length:2273 Species:Homo sapiens


Alignment Length:241 Identity:53/241 - (21%)
Similarity:83/241 - (34%) Gaps:76/241 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 YNTNNMQRLFWDNTSVTFGLSQVYFIYQVHSYMKITLVEAFYAQKTNGYEGWWAMEQWQKIGVVR 217
            ||..|...||....:..|.:..|       :...:..|...:..|.:| .||:       :..|.
Human   590 YNCRNNTDLFEKGNADEFTIESV-------TMRNVRRVRIRHDGKGSG-SGWY-------LDRVL 639

  Fly   218 LRQMRPVDCHIGLGKPEWDKKTYAPEWRLPYHRMHYTEKFWRIYDPFVPAEFEPSFLNGLLLNYD 282
            :|:.         |:||.|...:      |..|....:|    .|..:..|..||..:..|.|: 
Human   640 VREE---------GQPESDNVEF------PCLRWLDKDK----DDGQLVRELLPSDSSATLKNF- 684

  Fly   283 HYGYLLNYPEVAG-------YVVLMMSTKINCLKQI-----EYLRDYSWLDKNTSALFIDLTMYN 335
            .|...|...:|:|       |:.| ...|.:.:||:     ..|:||               ...
Human   685 RYHISLKTGDVSGASTDSRVYIKL-YGDKSDTIKQVLLVSDNNLKDY---------------FER 733

  Fly   336 ADANLFTLITLRVENSPFGIQLPRVHV--DSVSM-----LGNVETR 374
            ...:.|||.||.:.|      :.|:.:  ||..|     ||:|:.|
Human   734 GRVDEFTLETLNIGN------INRLVIGHDSTGMHASWFLGSVQIR 773

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brv2NP_648970.2 Polycystin_dom 171..368 CDD:466668 43/215 (20%)
PKD_channel 369..596 CDD:462341 3/6 (50%)
LOXHD1NP_001371403.1 PLAT_repeat 44..162 CDD:238854
PLAT_repeat 172..289 CDD:238854
PLAT_repeat 296..414 CDD:238854
PLAT_repeat 425..542 CDD:238854
PLAT_repeat 554..675 CDD:238854 23/118 (19%)
PLAT_repeat 684..805 CDD:238854 26/113 (23%)
PLAT 816..>896 CDD:412108
PLAT_repeat 1022..1142 CDD:238854
PLAT_repeat 1175..1295 CDD:238854
PLAT_repeat 1306..1432 CDD:238854
PLAT_repeat 1460..1580 CDD:238854
PLAT 1629..1744 CDD:412108
PLAT_repeat 1758..1875 CDD:238854
PLAT_repeat 1885..2005 CDD:238854
PLAT 2018..2119 CDD:412108
PLAT_repeat 2154..2272 CDD:238854
Blue background indicates that the domain is not in the aligned region.

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