DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or74a and Or83a

DIOPT Version :9

Sequence 1:NP_524123.1 Gene:Or74a / 39929 FlyBaseID:FBgn0036709 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_524234.2 Gene:Or83a / 40648 FlyBaseID:FBgn0037322 Length:453 Species:Drosophila melanogaster


Alignment Length:438 Identity:100/438 - (22%)
Similarity:164/438 - (37%) Gaps:120/438 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 LGFLV-FCEHNEVDFHYLIA---------------NRQDMD---NMLTGLPTYLILVEMQIRCFQ 98
            |..|| ||:.....|:|.::               .:.|:|   |.|.....||..:.|::    
  Fly    45 LAVLVRFCDLTYELFNYFVSVHIAGLYICTIYINYGQGDLDFFVNCLIQTIIYLWTIAMKL---- 105

  Fly    99 LAWHKDRFR-ALLQRFYAEI---YVSEEMEPHLFASI--QRQMLATRVNSTVYLLALLNFFLVPV 157
               :..||| .||....:.|   |.:.......|.::  ..:|....:.:.||...:...|.:.:
  Fly   106 ---YFRRFRPGLLNTILSNINDEYETRSAVGFSFVTMAGSYRMSKLWIKTYVYCCYIGTIFWLAL 167

  Fly   158 TNVIYHRREMLYKQVYPFDNTQ---------------------------LHFFIPLLVL-NFWVG 194
            . :.|..|.:.....||||.||                           ||..:.:|:. .:.|.
  Fly   168 P-IAYRDRSLPLACWYPFDYTQPGVYEVVFLLQAMGQIQVAASFASSSGLHMVLCVLISGQYDVL 231

  Fly   195 FI-ITSMLFGELNVMGELMMHLN-------ARYIQLGQ-----DLRRSAQMLLKKSSSLNVAIAY 246
            |. :.::|.....:||..|..||       |..::.||     :.....|.|||..||::.:.|:
  Fly   232 FCSLKNVLASSYVLMGANMTELNQLQAEQSAADVEPGQYAYSVEEETPLQELLKVGSSMDFSSAF 296

  Fly   247 RLNLTHILRRN----AALRDFGQRVEKEFTLRIFVMFAFSAGLLCALFFKAFTNPWGNVAYIVWF 307
            ||:....::.:    |||:    ::|..::...||.......|:|.:.|.:..:...|       
  Fly   297 RLSFVRCIQHHRYIVAALK----KIESFYSPIWFVKIGEVTFLMCLVAFVSTKSTAAN------- 350

  Fly   308 LAKFMELLALGMLGSILLKTTDELGMMYYTADWEQVIHQSDNVGE---------NVKLMKLVTLA 363
              .||.:::   ||..||....||.::.|.||  .|...|...||         ::|.::...:.
  Fly   351 --SFMRMVS---LGQYLLLVLYELFIICYFAD--IVFQNSQRCGEALWRSPWQRHLKDVRSDYMF 408

  Fly   364 IQLNSRPFF------ITGLNY--FRVSLTAVLKIIQGAFSYFTFLNSM 403
            ..||||..|      |:.||.  ||.::|.       |||:.|.|..|
  Fly   409 FMLNSRRQFQLTAGKISNLNVDRFRGTITT-------AFSFLTLLQKM 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or74aNP_524123.1 7tm_6 75..394 CDD:251636 87/389 (22%)
Or83aNP_524234.2 7tm_6 <155..440 CDD:251636 70/310 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.