DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND-24L and AT4G02580

DIOPT Version :10

Sequence 1:NP_648965.1 Gene:ND-24L / 39926 FlyBaseID:FBgn0036706 Length:238 Species:Drosophila melanogaster
Sequence 2:NP_567244.1 Gene:AT4G02580 / 828130 AraportID:AT4G02580 Length:255 Species:Arabidopsis thaliana


Alignment Length:246 Identity:91/246 - (36%)
Similarity:136/246 - (55%) Gaps:29/246 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RLLQPIRRIHLAPV------------LRLGAPVNATEIRKALKFEFSKDNQRRVKALLAWYPQAE 55
            |||: ||::...|.            ..|.:|.|..:    |.:|||:.||.:||.:|::||...
plant     9 RLLE-IRQVFRQPTSQVTRSLSTALNYHLDSPDNKPD----LPWEFSEANQSKVKEILSYYPSNY 68

  Fly    56 WKGALLPLLDIAQRQQ-GWLSISAVQAVAETIKIDPMEAFEAAQFYTMFFMKPRGKYVVSVCTST 119
            .:.|::||||:||:|. |||.:||:.|||:.|::.|:..:|.|.||:||.....|||.:.||.:|
plant    69 KQSAVIPLLDLAQQQNGGWLPVSAMNAVAKVIEVAPIRVYEVATFYSMFNRAKVGKYHLLVCGTT 133

  Fly   120 PCKLRGGDEIFEACKKTLNLEHGQTTPDMQFTLKEDYCMGACVNAPVLAVND----------DMY 174
            ||.:||..:|..|....|.::.|:.|.|..|::.|..|||.|||||::.|.|          :.:
plant   134 PCMIRGSRDIESALLDHLGVKRGEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYF 198

  Fly   175 EDLDEKSLANILADLRNDKLPPAGPRN-GRFASEPKGGLTTLKIQPPPPGF 224
            ||:..:.:..|:..||..:.||.|.:| .|....|:||..||..:|.||.|
plant   199 EDVTPEKVVEIVEKLRKGEKPPHGTQNPKRIKCGPEGGNKTLLGEPKPPQF 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-24LNP_648965.1 2Fe-2S_thioredx 44..190 CDD:460139 60/156 (38%)
AT4G02580NP_567244.1 2Fe-2S_thioredx 57..214 CDD:460139 60/156 (38%)

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