DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND-24L and Ndufv2

DIOPT Version :10

Sequence 1:NP_648965.1 Gene:ND-24L / 39926 FlyBaseID:FBgn0036706 Length:238 Species:Drosophila melanogaster
Sequence 2:NP_112326.1 Gene:Ndufv2 / 81728 RGDID:621733 Length:248 Species:Rattus norvegicus


Alignment Length:194 Identity:98/194 - (50%)
Similarity:133/194 - (68%) Gaps:0/194 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 FEFSKDNQRRVKALLAWYPQAEWKGALLPLLDIAQRQQGWLSISAVQAVAETIKIDPMEAFEAAQ 98
            |:|:.:|..|::|::..||:.....|:||:||:||||.|||.|||:..|||.:::.||..:|.|.
  Rat    52 FDFTPENYERIEAIVRNYPEGHRAAAVLPVLDLAQRQNGWLPISAMNKVAEVLQVPPMRVYEVAT 116

  Fly    99 FYTMFFMKPRGKYVVSVCTSTPCKLRGGDEIFEACKKTLNLEHGQTTPDMQFTLKEDYCMGACVN 163
            ||||:..||.|||.:.|||:|||.||..|.|.|..::.|.::.|:||||..|||.|..|:|||||
  Rat   117 FYTMYNRKPVGKYHIQVCTTTPCMLRDSDSILETLQRKLGIKVGETTPDKLFTLIEVECLGACVN 181

  Fly   164 APVLAVNDDMYEDLDEKSLANILADLRNDKLPPAGPRNGRFASEPKGGLTTLKIQPPPPGFMMQ 227
            ||::.:|||.||||..|.:..|:.:||..|:|..|||:|||..||.||||:|...|..|||.:|
  Rat   182 APMVQINDDYYEDLTPKDIEEIIDELRAGKVPKPGPRSGRFCCEPAGGLTSLTEPPKGPGFGVQ 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-24LNP_648965.1 2Fe-2S_thioredx 44..190 CDD:460139 72/145 (50%)
Ndufv2NP_112326.1 2Fe-2S_thioredx 62..208 CDD:460139 72/145 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 229..248 9/17 (53%)

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