DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND-24L and ndufv2

DIOPT Version :10

Sequence 1:NP_648965.1 Gene:ND-24L / 39926 FlyBaseID:FBgn0036706 Length:238 Species:Drosophila melanogaster
Sequence 2:NP_001017166.1 Gene:ndufv2 / 549920 XenbaseID:XB-GENE-963050 Length:243 Species:Xenopus tropicalis


Alignment Length:231 Identity:106/231 - (45%)
Similarity:144/231 - (62%) Gaps:14/231 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LLQPIRR-IHL---------APVLRLGAPVNATEIRKALKFEFSKDNQRRVKALLAWYPQAEWKG 58
            ||..:|| :|.         |..:....|.|..:    ..|||:.:|.:|::|::..||:....|
 Frog    11 LLSSVRRYLHTTTAYNGAGGASFVHRDTPENNPD----TPFEFTSENYKRIEAIIGNYPEGHKAG 71

  Fly    59 ALLPLLDIAQRQQGWLSISAVQAVAETIKIDPMEAFEAAQFYTMFFMKPRGKYVVSVCTSTPCKL 123
            |::|:||:||||.|||.|||:..|||.:::..|..:|.|.|||||..||.|||.|.:||:|||.|
 Frog    72 AVIPVLDLAQRQHGWLPISAMNKVAEVLEMPAMRVYEVATFYTMFNRKPVGKYHVQICTTTPCML 136

  Fly   124 RGGDEIFEACKKTLNLEHGQTTPDMQFTLKEDYCMGACVNAPVLAVNDDMYEDLDEKSLANILAD 188
            ...|.|.||.:|.|.:..|:||.|..|||.|..|:|||||||::.:||:.||||..|.:.||:.:
 Frog   137 CNSDSILEAIEKKLGIHVGETTSDKLFTLTEVECLGACVNAPMVQINDNYYEDLTPKDIENIIDE 201

  Fly   189 LRNDKLPPAGPRNGRFASEPKGGLTTLKIQPPPPGF 224
            |:..|:|..|||||||:.||.||||:|...|..|||
 Frog   202 LKAGKVPTPGPRNGRFSCEPAGGLTSLTGPPKGPGF 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-24LNP_648965.1 2Fe-2S_thioredx 44..190 CDD:460139 72/145 (50%)
ndufv2NP_001017166.1 2Fe-2S_thioredx 57..203 CDD:460139 72/145 (50%)

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