DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6512 and AFG3

DIOPT Version :9

Sequence 1:NP_730248.2 Gene:CG6512 / 39922 FlyBaseID:FBgn0036702 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_010933.1 Gene:AFG3 / 856737 SGDID:S000000819 Length:761 Species:Saccharomyces cerevisiae


Alignment Length:703 Identity:359/703 - (51%)
Similarity:457/703 - (65%) Gaps:73/703 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 GENGGGGD--------RERWILLGAIGAVVLVGSFA---FFEMGY-------------------K 186
            |:|.|..|        :::....|::........||   |..:|:                   :
Yeast    82 GKNNGNKDNNSNKEDGKDKRNEFGSLSEYFRSKEFANTMFLTIGFTIIFTLLTPSSNNSGDDSNR 146

  Fly   187 EISWKEFVNSYLSKGVVEKLEVVNKKWVRVRLQQNSNSGSGVLWFNIGSVDSFERNLEAAQTEQG 251
            .:::::|...||.||:|.|:.||||..|...|.....    |:.|.|||||.||..::..|....
Yeast   147 VLTFQDFKTKYLEKGLVSKIYVVNKFLVEAELVNTKQ----VVSFTIGSVDIFEEQMDQIQDLLN 207

  Fly   252 TESINFVPVIYRNEVEAAS----LTGLLPTLLIIGFLVYMMRKSADMMGGGRGRKGGGLFG--GV 310
            ....:.:|:.|   :|.:|    |...|||::::|.|.::.||.........|..||||.|  .|
Yeast   208 IPPRDRIPIKY---IERSSPFTFLFPFLPTIILLGGLYFITRKINSSPPNANGGGGGGLGGMFNV 269

  Fly   311 MQSTAKLTN-PNEIGVGFKDVAGCEEAKIEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGK 374
            .:|.|||.| ..:|.:.||:||||:|||.||||||:|||||.:|..||||||:||:|:|||||||
Yeast   270 GKSRAKLFNKETDIKISFKNVAGCDEAKQEIMEFVHFLKNPGKYTKLGAKIPRGAILSGPPGTGK 334

  Fly   375 TLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFAMARKHAPCILFIDEIDAVGRKR--G 437
            |||||||||||||||::||||||:|||||||.|||||:|..||..||.|:|||||||:|::|  |
Yeast   335 TLLAKATAGEANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMAPSIIFIDEIDAIGKERGKG 399

  Fly   438 GKTFGGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDILDKALMRPGRFDRQIYVPAPDIKG 502
            |...|.:.|:|.||||||||||||.|:..|||||.|||.|:||.||||||||||.|.:.:||:.|
Yeast   400 GALGGANDEREATLNQLLVEMDGFTTSDQVVVLAGTNRPDVLDNALMRPGRFDRHIQIDSPDVNG 464

  Fly   503 RASIFKVHLG--NLKTSL--DKNELSRKMAALTPGFTGADIANVCNEAALIAARDSKDSIVLKHF 563
            |..|:.|||.  ||...|  |.|.||.|:|.||||||||||||.||||||||||.:...|.:.||
Yeast   465 RQQIYLVHLKRLNLDPLLTDDMNNLSGKLATLTPGFTGADIANACNEAALIAARHNDPYITIHHF 529

  Fly   564 EQAIERVIAGMEKKTNVLAPEEKRTVAHHEAGHAVAGWFLEHADPLLKVSIIPRGKG-LGYAQYL 627
            ||||||||||:||||.||:.||||:||:|||||||.||||::|||||||||||||:| |||||||
Yeast   530 EQAIERVIAGLEKKTRVLSKEEKRSVAYHEAGHAVCGWFLKYADPLLKVSIIPRGQGALGYAQYL 594

  Fly   628 PKDHYLLSKEQLFDRMCMTLGGRVAEELFFNRITTGAQDDLKKITDIAYSQVVRFGMNEKVGQVS 692
            |.|.||:|:||...||.|.|||||:|||.|..:|:||.||.||:|.:|.:.|...||:.|:|.:|
Yeast   595 PPDQYLISEEQFRHRMIMALGGRVSEELHFPSVTSGAHDDFKKVTQMANAMVTSLGMSPKIGYLS 659

  Fly   693 FDVGQAGDPVFSKPYSEDTAQLIDNEVRSIIKCAHEATTSLLTKHKENVQKVAERLLQNEVLSRD 757
            ||... |:...:||:|..||:.||.||:||:..||.|.|.||||:.:.|..||:.||:.|.::|:
Yeast   660 FDQND-GNFKVNKPFSNKTARTIDLEVKSIVDDAHRACTELLTKNLDKVDLVAKELLRKEAITRE 723

  Fly   758 DMIELLGPRPFKEKS-TYEEFVEGTGSFEEDTTLPEGLKSWNKEKERTEPLDA 809
            |||.|||||||||:: .:|::::                    .|..|||.:|
Yeast   724 DMIRLLGPRPFKERNEAFEKYLD--------------------PKSNTEPPEA 756

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6512NP_730248.2 FtsH_ext 163..259 CDD:284011 28/117 (24%)
FtsH_fam 271..764 CDD:273520 309/502 (62%)
AAA 365..496 CDD:278434 96/132 (73%)
Peptidase_M41 580..762 CDD:279742 106/182 (58%)
AFG3NP_010933.1 FtsH_ext 124..215 CDD:377663 24/94 (26%)
FtsH_fam 223..730 CDD:273520 310/507 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 205 1.000 Domainoid score I531
eggNOG 1 0.900 - - E1_COG0465
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4947
Inparanoid 1 1.050 638 1.000 Inparanoid score I115
Isobase 1 0.950 - 0 Normalized mean entropy S505
OMA 1 1.010 - - QHG57866
OrthoFinder 1 1.000 - - FOG0001522
OrthoInspector 1 1.000 - - otm46474
orthoMCL 1 0.900 - - OOG6_100384
Panther 1 1.100 - - LDO PTHR43655
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2012
SonicParanoid 1 1.000 - - X961
TreeFam 1 0.960 - -
1514.810

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