DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6512 and YME1

DIOPT Version :9

Sequence 1:NP_730248.2 Gene:CG6512 / 39922 FlyBaseID:FBgn0036702 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_015349.1 Gene:YME1 / 856135 SGDID:S000006228 Length:747 Species:Saccharomyces cerevisiae


Alignment Length:791 Identity:252/791 - (31%)
Similarity:405/791 - (51%) Gaps:112/791 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 VYILPTELSPLLRYVVKQI-----QLLCKKP----PKGFEKYFEAGGKSSGQPKGSVGDKKPPAG 96
            :.:.||..:.:||....::     .||.:|.    .|.|.:::..  |:||:    :..||....
Yeast     6 ILVSPTVTTNVLRIFAPRLPQIGASLLVQKKWALRSKKFYRFYSE--KNSGE----MPPKKEADS 64

  Fly    97 SSKSASEKPSTSTPASVKPSRSQTDAKSDWNFGMFSNSSRGPAGKGGNSLGGRPLGENGGGGDRE 161
            |.|::::...:|...|..|..|.|:.|:.......|::......:..|.....|        |.:
Yeast    65 SGKASNKSTISSIDNSQPPPPSNTNDKTKQANVAVSHAMLATREQEANKDLTSP--------DAQ 121

  Fly   162 RWILLGAIGAVVLVGSFAFFEMGYKEISWKEFVNSYLSKGV----------VEKLEVVNKKWVRV 216
            .                ||:::..:....:..|:.:.:.|:          :|.|:.:.:.....
Yeast   122 A----------------AFYKLLLQSNYPQYVVSRFETPGIASSPECMELYMEALQRIGRHSEAD 170

  Fly   217 RLQQNSNSGSGVLWFNIGSVDSFERNLEAAQTEQGTESINFVPVIY------RNE-----VEAAS 270
            .::||..:.|     :.|:|:.   :|.::.:.|.....|| |.:|      |.|     |..::
Yeast   171 AVRQNLLTAS-----SAGAVNP---SLASSSSNQSGYHGNF-PSMYSPLYGSRKEPLHVVVSEST 226

  Fly   271 LTGL---LPTLLIIGFLVYMMRKSADMMGGGRGRKGGGLFGGVMQSTAKLTNPN---------EI 323
            .|.:   :..||:.|.|.|...:.               |..:.::|..|.:..         :.
Yeast   227 FTVVSRWVKWLLVFGILTYSFSEG---------------FKYITENTTLLKSSEVADKSVDVAKT 276

  Fly   324 GVGFKDVAGCEEAKIEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVP 388
            .|.|.||.||:||:.|:.|.|:|||:|.:|..||.|:|||.:|||||||||||||:||||||.|.
Yeast   277 NVKFDDVCGCDEARAELEEIVDFLKDPTKYESLGGKLPKGVLLTGPPGTGKTLLARATAGEAGVD 341

  Fly   389 FITVSGSEFLEMFVGVGPSRVRDMFAMARKHAPCILFIDEIDAVGRKRGGKTFGGHSEQENTLNQ 453
            |..:|||||.|::||||..|:||:||.||..||.|:||||:||:|.||..|   ..:..:.||||
Yeast   342 FFFMSGSEFDEVYVGVGAKRIRDLFAQARSRAPAIIFIDELDAIGGKRNPK---DQAYAKQTLNQ 403

  Fly   454 LLVEMDGFNTTTNVVVLAATNRVDILDKALMRPGRFDRQIYVPAPDIKGRASIFKVHLGNLKTSL 518
            ||||:|||:.|:.::::.|||..:.|||||.||||||:.:.|..||::|||.|.|.|:  .|.:|
Yeast   404 LLVELDGFSQTSGIIIIGATNFPEALDKALTRPGRFDKVVNVDLPDVRGRADILKHHM--KKITL 466

  Fly   519 DKNELSRKMAALTPGFTGADIANVCNEAALIAARDSKDSIVLKHFEQAIERVIAGMEKKTNVLAP 583
            ..|.....:|..|||.:||::||:.|:||:.|.:.:..|:.:.|||.|.::::.|.|:||.||..
Yeast   467 ADNVDPTIIARGTPGLSGAELANLVNQAAVYACQKNAVSVDMSHFEWAKDKILMGAERKTMVLTD 531

  Fly   584 EEKRTVAHHEAGHAVAGWFLEHADPLLKVSIIPRGKGLGYAQYLPK-DHYLLSKEQLFDRMCMTL 647
            ..::..|.||||||:...:...|.||.|.:|:|||:.||....||: |...::|.:...|:.:.:
Yeast   532 AARKATAFHEAGHAIMAKYTNGATPLYKATILPRGRALGITFQLPEMDKVDITKRECQARLDVCM 596

  Fly   648 GGRVAEELFFNR--ITTGAQDDLKKITDIAYSQVVRFGMNEKVGQVSFDVGQAGDPVFSKPYSED 710
            ||::||||.:.:  .|:|...||:..|..|.:.|.::||::.||.|:.....       :.:|..
Yeast   597 GGKIAEELIYGKDNTTSGCGSDLQSATGTARAMVTQYGMSDDVGPVNLSENW-------ESWSNK 654

  Fly   711 TAQLIDNEVRSIIKCAHEATTSLLTKHKENVQKVAERLLQNEVLSRDDMIELL-GPRPFKEKSTY 774
            ...:.||||..::|.:.|....||||....:.::|:.|::.|.|...::.::. |.:..|.|::.
Yeast   655 IRDIADNEVIELLKDSEERARRLLTKKNVELHRLAQGLIEYETLDAHEIEQVCKGEKLDKLKTST 719

  Fly   775 EEFVEGTGSFE 785
            ...|||..|.|
Yeast   720 NTVVEGPDSDE 730

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6512NP_730248.2 FtsH_ext 163..259 CDD:284011 15/105 (14%)
FtsH_fam 271..764 CDD:273520 198/508 (39%)
AAA 365..496 CDD:278434 77/130 (59%)
Peptidase_M41 580..762 CDD:279742 57/184 (31%)
YME1NP_015349.1 HflB 227..712 CDD:223541 199/511 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0465
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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