DRSC/TRiP Functional Genomics Resources

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Protein Alignment Afg3l2 and AT4G25835

DIOPT Version :10

Sequence 1:NP_730248.2 Gene:Afg3l2 / 39922 FlyBaseID:FBgn0036702 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_567730.1 Gene:AT4G25835 / 828689 AraportID:AT4G25835 Length:506 Species:Arabidopsis thaliana


Alignment Length:462 Identity:108/462 - (23%)
Similarity:184/462 - (39%) Gaps:79/462 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 LVGSFAFFEMGYKE-ISWKEFVNS---YLSKGV------VEKLEVVNKKWVRVRLQQNSNSGSGV 228
            |..:|.:|::...: ::..|..|:   |||..|      :.....||...|...|   ||:.|.|
plant    44 LFSTFCYFDITEIDGVNTNELYNAVQLYLSSSVSIAGNRLSLTRAVNSSSVTFGL---SNNDSIV 105

  Fly   229 LWFNIGSVDSFERNLEAAQTEQGTESINFVPVIYRNEVEAASLTGLLPTLLIIGFLVYMMRKSAD 293
            ..||..:|     ..|...|::.|::..:.|:..........:......|::..:|.|:|.|:.:
plant   106 DTFNSVTV-----VWEHIVTQRQTQTFAWRPMPEEKRGFTLRIKKKDKNLILDSYLDYIMEKANE 165

  Fly   294 MMGGGRGR------KGGGLFG-GVMQSTAKLTNPNEIGVGFKDVAGCEEAKIEIME-FVNFLKNP 350
            :....:.|      :||.|.. |:...:....:|:.    |..:|.....|.:||| ..:|.:..
plant   166 IRRLNQDRLLYTNSRGGSLDSRGLPWESVPFKHPST----FDTLAMDPVKKQQIMEDLKDFAECQ 226

  Fly   351 QQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFAM 415
            ..|...|....:|.:|.|||||||:.:..|.|.........      ||:......|.:|.:  :
plant   227 SFYERTGRAWKRGYLLYGPPGTGKSSMIAAMANYLRYDIYD------LELTEVKSNSELRKL--L 283

  Fly   416 ARKHAPCILFIDEIDA----VGRKRGGKTFGGHSEQEN----------------TLNQLLVEMDG 460
            .:..:..|:.|::||.    ..|.:...| |.::|.|.                ||:.||...||
plant   284 MKTSSKSIIVIEDIDCSINLTNRNKKQST-GSYNEPEMLTGSGLGDDLGDGNTITLSGLLNFTDG 347

  Fly   461 FNTT--TNVVVLAATNRVDILDKALMRPGRFDRQIYVPAPDIKGRASIFKVHLGNLKTSLDK--- 520
            ..:.  :..:.:..||.::.||.||:|.||.|..|::..........:.:.:||..:..|:.   
plant   348 LWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHIHMSYCTFSSVKILLRNYLGFEEGDLNDVVL 412

  Fly   521 NELSRKM--AALTPGFTGADIANVCNEAALIAARDSKDSIV---LKHFEQAIER-VIAGMEKKTN 579
            .||:..:  |.:||    ||::.     |||..|..|:..|   |......:|| ...|..:..|
plant   413 KELAEVVDRAEITP----ADVSE-----ALIKNRRDKERAVRELLVDLRSRVERNEKNGKSRVQN 468

  Fly   580 VLAPEEK 586
            |...|::
plant   469 VSLEEQE 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Afg3l2NP_730248.2 HflB 168..765 CDD:440233 108/462 (23%)
AT4G25835NP_567730.1 AAA_assoc 26..119 CDD:464152 21/82 (26%)
P-loop containing Nucleoside Triphosphate Hydrolases <160..>261 CDD:476819 28/104 (27%)
RecA-like_BCS1 215..384 CDD:410918 47/177 (27%)

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