DRSC/TRiP Functional Genomics Resources

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Protein Alignment Afg3l2 and AT4G05380

DIOPT Version :10

Sequence 1:NP_730248.2 Gene:Afg3l2 / 39922 FlyBaseID:FBgn0036702 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_001319874.1 Gene:AT4G05380 / 825886 AraportID:AT4G05380 Length:460 Species:Arabidopsis thaliana


Alignment Length:220 Identity:55/220 - (25%)
Similarity:92/220 - (41%) Gaps:43/220 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   327 FKDVAGCEEAKIEIMEFVNFLKNPQQYI-DLGAKIPKGAMLTGPPGTGKTLLAKATAGEAN---- 386
            |:.:|...|.|..::..::...|.:.:. .:|....:|.:|.|||||||:.|..|.|...|    
plant   208 FETLAMEPELKNTLIRDLDAFSNGKDFFKTVGRAWKRGYLLYGPPGTGKSSLVAAIANFMNYSIY 272

  Fly   387 -VPFITVSGSEFLEMFVGVGPSRVRDMFAMARKHAPCILFIDEIDAVGR----KRGGKTFGGHSE 446
             :...:|.....|...:....:|             .||.|:::|..|.    ::..|....:.|
plant   273 DLQIQSVKDDAMLRQILTSTENR-------------SILLIEDLDCSGADTTCRKENKDETEYGE 324

  Fly   447 QEN---------TLNQLLVEMDGF--NTTTNVVVLAATNRVDILDKALMRPGRFDRQIYVP--AP 498
            .:|         ||:.||..:||.  :.....:::..||..:.||.||:||||.|..|.:.  .|
plant   325 NQNKKKKKDPKVTLSGLLNFVDGLWSSCVEERIIIFTTNHKEKLDPALLRPGRMDVHILMDYCTP 389

  Fly   499 DIKGRASIFKVHLGNLKTSLDKNEL 523
                  .:|| .|..|...::::||
plant   390 ------IVFK-KLAALYLEIEEHEL 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Afg3l2NP_730248.2 HflB 168..765 CDD:440233 55/220 (25%)
AT4G05380NP_001319874.1 AAA_assoc 37..135 CDD:464152
RecA-like_BCS1 221..384 CDD:410918 44/175 (25%)
Blue background indicates that the domain is not in the aligned region.

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