DRSC/TRiP Functional Genomics Resources

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Protein Alignment Afg3l2 and AT3G50940

DIOPT Version :10

Sequence 1:NP_730248.2 Gene:Afg3l2 / 39922 FlyBaseID:FBgn0036702 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_190663.2 Gene:AT3G50940 / 824258 AraportID:AT3G50940 Length:451 Species:Arabidopsis thaliana


Alignment Length:390 Identity:91/390 - (23%)
Similarity:153/390 - (39%) Gaps:104/390 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   209 VNKKWVRVRLQQNSNSGSGVLWFNIGSVDSFERNLEAAQTEQGTESINFVPVIYRNEVEAASLTG 273
            |:||..|.....||...|.|..:.:    ||.:..:....|      :::|.:..   :|||:..
plant   133 VDKKDFRNPRDLNSTLKSEVRSYEL----SFRKKFKNMVLE------SYLPFVVE---QAASIKQ 184

  Fly   274 LLPTLLIIGFLVYMMRKSADMMGGGRGRKGGGLFGGVMQSTAKLTNPNEIGVGFKDVAGCEEAKI 338
            ...||.|.....|                      .|..::..|.:|:.    |:.:|...|.|.
plant   185 KFKTLKIFTVDSY----------------------SVEWTSVTLDHPST----FRTLALDPEVKK 223

  Fly   339 EIMEFVN-FLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEAN-----VPFITVSGSEF 397
            .::|.:: |::....|..:|....:|.:|.|||||||:.|..|.|...|     :...:::.:..
plant   224 NLVEDLDRFVQRKGFYGRVGKAWKRGYLLYGPPGTGKSSLIAAIANHLNFDIYDLDLTSLNNNAE 288

  Fly   398 LEMFVGVGPSRVRDMFAMARKHAPCILFIDEIDAVGRKRGGKTFGGHSEQEN--------TLNQL 454
            |.          |.:.:.|.:   .||.:::||.....:...|     :|||        ||:.|
plant   289 LR----------RLLMSTANR---SILVVEDIDCSIELKDRST-----DQENNDPLHKTVTLSGL 335

  Fly   455 LVEMDGF--NTTTNVVVLAATNRVDILDKALMRPGRFDRQIYV----PAPDIKGRASIFKVHLGN 513
            |..:||.  :.....:::..||..:.||.||:||||.|..|::    ||        .|||...|
plant   336 LNFVDGLWSSCGNERIIVFTTNYREKLDPALLRPGRMDMHIHMSYCTPA--------AFKVLASN 392

  Fly   514 LKTSLDK------NELSRKMAALTPGFTGADIANVCNEAALIAARDSKDSIV--LKHFEQAIERV 570
            .....|.      .|..|:: .:||    |::|.      .:...||.|.::  |..|.:|.:::
plant   393 YLEIQDHILFEQIEEFIREI-EVTP----AEVAE------QLMRSDSVDKVLQGLVEFLKAKKQI 446

  Fly   571  570
            plant   447  446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Afg3l2NP_730248.2 HflB 168..765 CDD:440233 91/390 (23%)
AT3G50940NP_190663.2 AAA_assoc 38..130 CDD:464152
RecA-like_BCS1 225..378 CDD:410918 46/170 (27%)
Blue background indicates that the domain is not in the aligned region.

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