DRSC/TRiP Functional Genomics Resources

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Protein Alignment Afg3l2 and AT3G28610

DIOPT Version :10

Sequence 1:NP_730248.2 Gene:Afg3l2 / 39922 FlyBaseID:FBgn0036702 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_189502.2 Gene:AT3G28610 / 822491 AraportID:AT3G28610 Length:474 Species:Arabidopsis thaliana


Alignment Length:276 Identity:64/276 - (23%)
Similarity:115/276 - (41%) Gaps:48/276 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   327 FKDVAGCEEAKIEIM-EFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFI 390
            |:.:|...:.|.:|: :...|......|..:|....:|.:|.|||||||:.:..|.|...|....
plant   202 FETLAMDPKKKEQILNDLAAFNNGKDYYKKIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYSIY 266

  Fly   391 TVSGSEFLEMFVGVGPSRVRDMFAMARKHAPCILFIDEIDA----VGRKRGGKT-------FGGH 444
            .      ||:......|.:|.:.......:  |:.|::||.    .|:::..::       .|..
plant   267 D------LELTAIQNNSELRKILTATSNKS--IIVIEDIDCSLDLTGKRKKKESNLMIWRKDGDQ 323

  Fly   445 SEQEN----TLNQLLVEMDGFNTTTNV--VVLAATNRVDILDKALMRPGRFDRQIYVPAPDIKGR 503
            ..:||    ||:.||..:||..:....  :::..||.:..||.||:|.||.|..|.:.....:..
plant   324 DNEENKSFVTLSGLLNFIDGIWSACGQERIIVFTTNHLAKLDPALIRRGRMDMHIELSYCTFEAF 388

  Fly   504 ASIFKVHLGNLKTSLDKNELSRKMAALTPGFTGADIANVCNEAALIAARDSKDSIVLKHFEQ--- 565
            .::.|.:|     .||.:.|..|:.:|.             :...||..|..::::.|:.|.   
plant   389 KTLAKNYL-----DLDSHPLFSKIESLM-------------KETNIAPADVAENLMKKNRETDAD 435

  Fly   566 -AIERVIAGMEKKTNV 580
             ::..:|..:|:|..|
plant   436 GSLNDLIESLERKKKV 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Afg3l2NP_730248.2 HflB 168..765 CDD:440233 64/276 (23%)
AT3G28610NP_189502.2 AAA_assoc 45..128 CDD:464152
RecA-like_BCS1 215..380 CDD:410918 45/172 (26%)
Blue background indicates that the domain is not in the aligned region.

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