DRSC/TRiP Functional Genomics Resources

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Protein Alignment Afg3l2 and AT3G28560

DIOPT Version :10

Sequence 1:NP_730248.2 Gene:Afg3l2 / 39922 FlyBaseID:FBgn0036702 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_189497.1 Gene:AT3G28560 / 822486 AraportID:AT3G28560 Length:257 Species:Arabidopsis thaliana


Alignment Length:203 Identity:40/203 - (19%)
Similarity:72/203 - (35%) Gaps:57/203 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 KYFEAGGKSSGQPKGSVGD--------KKPPAGSSKSASE-KPSTSTPASVKPSRSQTD----AK 123
            |:.|..|:  |..|....|        |....|:...|:| |.|.|...|:....:..|    .|
plant    48 KFNEYSGE--GLEKSEAFDTIHNYLSTKSTALGNRLKANESKKSKSLVLSLDDHETVEDVFQGVK 110

  Fly   124 SDWNFGMFSNSSRGPAGKGGNSLGGRPLGENGGGGDRERWILLGAIGAVVLVGSFAFFEMGYKEI 188
            ..|:..:..|.::....:            :.|..:| |::.|.             |...::|:
plant   111 VKWSSSVRENQNQSSTNR------------DKGFAER-RYLTLS-------------FHSRHREM 149

  Fly   189 SWKEFVNSYLSKGVVEKLEVVNKKWVRVRLQQNSNSGS------GVLWFNI-----GSVDSFERN 242
                ...:||...:.|..|:..||..| :|..|::|..      |..|.|:     .::::|..:
plant   150 ----ITTTYLDHVLREGKEIGLKKRER-KLYTNNSSHEWISWRLGTNWSNVSFDHPATLETFAMD 209

  Fly   243 LEAAQTEQ 250
            .|..:.|:
plant   210 PEKNKAEK 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Afg3l2NP_730248.2 HflB 168..765 CDD:440233 18/94 (19%)
AT3G28560NP_189497.1 AAA_assoc 29..117 CDD:464152 17/70 (24%)

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