DRSC/TRiP Functional Genomics Resources

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Protein Alignment Afg3l2 and AT2G18190

DIOPT Version :10

Sequence 1:NP_730248.2 Gene:Afg3l2 / 39922 FlyBaseID:FBgn0036702 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_179411.2 Gene:AT2G18190 / 816332 AraportID:AT2G18190 Length:494 Species:Arabidopsis thaliana


Alignment Length:430 Identity:95/430 - (22%)
Similarity:163/430 - (37%) Gaps:93/430 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 YLSKG--VVEKLEVVNKKWVRVRLQQNSNSGSGVLWFNIGSVDSFERNLE-----------AAQT 248
            |:.||  :::..|....:|..|. .:|..|.....::.:    :||:.|.           .|::
plant   108 YIEKGEEILDTFENSELRWTYVE-SENEASQKEKRYYEL----TFEKKLRDKVMNSYLSHVVAES 167

  Fly   249 EQGTESINFVPVIYRNEVEAASLTGLLPTLLIIGFLVYMMRKSADMMGGGRGRKGGGLFGGVMQS 313
            |:....:..|. :|..:|.|:                    |..|.|.|.    |.|..      
plant   168 EETKRDLRAVK-LYSRDVRAS--------------------KDDDGMAGA----GWGCI------ 201

  Fly   314 TAKLTNPNEIGVGFKDVA---GCEEAKIEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKT 375
              .|.:|:.    |:.:|   |.::..|:.||  .|||..:.|..:|....:|.:|.|||||||:
plant   202 --NLEHPST----FETLAMDPGAKKKIIDDME--RFLKRREFYKRVGKAWKRGYLLYGPPGTGKS 258

  Fly   376 LLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFAMARKHAPCILFIDEIDAVGRKRGGKT 440
            .|..|.|.........:..|...|      .::::.:.......:  ||.|::||....:...:.
plant   259 SLIAAMANYLKFDVFDLELSSIYE------NAQLKSILLSTTNRS--ILVIEDIDCSSAEVVDRE 315

  Fly   441 FGGHSEQEN------TLNQLLVEMDGFNTT--TNVVVLAATNRVDILDKALMRPGRFDRQIYVPA 497
            ...:.|.|.      ||:.||..:||..::  ...:::..||..:.||.||:||||.|..|.:..
plant   316 ADEYQEYEEGYYGRVTLSGLLNFVDGLWSSFGDERIIVFTTNHKERLDPALLRPGRMDMHINMSY 380

  Fly   498 PDIKGRASIFKVHLG----------NLKTSLDKNELSRKMAALTPGFTGADIANVCNEAALIAAR 552
            ....|..::...:||          .::..:|..|::  .|.|.......|..:|.....:....
plant   381 CTGLGFRTLVSNYLGLGGLNHPLCEEIEALIDSTEVT--PAELAEELMQEDDTDVVLRGVVSFVE 443

  Fly   553 DSKDSI-VLKHFEQAIERVIAGMEK----KTNVLAPEEKR 587
            :.|..| ..|..|.:..|.:.|.:|    .||.|...:|:
plant   444 NRKVEISKTKELEGSTCRKLDGDDKHNVSSTNDLKKTKKK 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Afg3l2NP_730248.2 HflB 168..765 CDD:440233 95/430 (22%)
AT2G18190NP_179411.2 AAA_assoc 37..130 CDD:464152 5/21 (24%)
RecA-like_BCS1 222..378 CDD:410918 47/165 (28%)

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