DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6512 and Afg3l2

DIOPT Version :9

Sequence 1:NP_730248.2 Gene:CG6512 / 39922 FlyBaseID:FBgn0036702 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_081406.1 Gene:Afg3l2 / 69597 MGIID:1916847 Length:802 Species:Mus musculus


Alignment Length:789 Identity:495/789 - (62%)
Similarity:588/789 - (74%) Gaps:76/789 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 LLRYVVKQIQLLCKKPPKGFEKYFEAG--GKSSGQPKGSVGDKKPPAGSSKSASEKPSTSTPASV 113
            |||.|:...|..|.:|||||||||..|  ||.:.:||.:||:||.|              .|:..
Mouse    54 LLRDVIAAYQRFCSRPPKGFEKYFPNGKNGKKASEPKEAVGEKKEP--------------QPSGP 104

  Fly   114 KPSRSQTDAKSDWNFGMFSNSSRGPAGKGGNSLGGR---------------PLGENGGGGDRERW 163
            :||                    |.||.||....|:               |..:.    |...:
Mouse   105 QPS--------------------GGAGGGGGKRRGKKEDSHWWSRFQKGDFPWDDK----DFRMY 145

  Fly   164 ILLGAI--GAVVLVGSFAFFEMGYKEISWKEFVNSYLSKGVVEKLEVVNKKWVRVRLQQNSNSGS 226
            .|..|:  |.|::.  |.|...| :||:||:|||:|||||||::||||||::|||..........
Mouse   146 FLWTALFWGGVMIY--FVFKSSG-REITWKDFVNNYLSKGVVDRLEVVNKRFVRVTFTPGKTPVD 207

  Fly   227 G-VLWFNIGSVDSFERNLEAAQTEQGTESINFVPVIYRNEVEAASLTGLLPTLLIIGFLVYMMRK 290
            | .:||||||||:||||||..|.|.|.|..|.|||:|..|.:.:.|..:|||:|||.||:|.:|:
Mouse   208 GQYVWFNIGSVDTFERNLETLQQELGIEGENRVPVVYIAESDGSFLLSMLPTVLIIAFLLYTIRR 272

  Fly   291 SADMMGGGR-GRKGGGLFGGVMQSTAKLTNPNEIGVGFKDVAGCEEAKIEIMEFVNFLKNPQQYI 354
            ..  .|.|| ||..|||| .|.::|||:.. :||.|.|||||||||||:||||||||||||:||.
Mouse   273 GP--AGIGRTGRGMGGLF-SVGETTAKVLK-DEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQ 333

  Fly   355 DLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFAMARKH 419
            ||||||||||:|||||||||||||||||||||||||||||||||||||||||:||||:||:|||:
Mouse   334 DLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKN 398

  Fly   420 APCILFIDEIDAVGRKRGGKTFGGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDILDKALM 484
            ||||||||||||||||||...|||.||||||||||||||||||||||||:||.|||.||||.||:
Mouse   399 APCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALL 463

  Fly   485 RPGRFDRQIYVPAPDIKGRASIFKVHLGNLK--TSLDKNELSRKMAALTPGFTGADIANVCNEAA 547
            |||||||||::..||||||||||||||..||  ::|:|::|:||:|:|||||:|||:||||||||
Mouse   464 RPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAA 528

  Fly   548 LIAARDSKDSIVLKHFEQAIERVIAGMEKKTNVLAPEEKRTVAHHEAGHAVAGWFLEHADPLLKV 612
            |||||...|:|..|||||||||||.|:||||.||.||||:|||:||||||||||:||||||||||
Mouse   529 LIAARHLSDAINEKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKV 593

  Fly   613 SIIPRGKGLGYAQYLPKDHYLLSKEQLFDRMCMTLGGRVAEELFFNRITTGAQDDLKKITDIAYS 677
            |||||||||||||||||:.||.:||||.|||||||||||:||:||.||||||||||:|:|..||:
Mouse   594 SIIPRGKGLGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVSEEIFFGRITTGAQDDLRKVTQSAYA 658

  Fly   678 QVVRFGMNEKVGQVSFDVGQAGDPVFSKPYSEDTAQLIDNEVRSIIKCAHEATTSLLTKHKENVQ 742
            |:|:|||||||||:|||:.:.||.|..|||||.||::||:|||.:|..|:..|.:|||:.|.:|:
Mouse   659 QIVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARMIDDEVRILISDAYRRTVALLTEKKADVE 723

  Fly   743 KVAERLLQNEVLSRDDMIELLGPRPFKEKSTYEEFVEGTGSFEEDTTLPEGLKSWN--------K 799
            |||..||:.|||.::||::|||||||.||||||||||||||.:|||:|||||:.||        |
Mouse   724 KVALLLLEKEVLDKNDMVQLLGPRPFTEKSTYEEFVEGTGSLDEDTSLPEGLQDWNKEREKEEKK 788

  Fly   800 EKERTEPLD 808
            |||:.|||:
Mouse   789 EKEKEEPLN 797

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6512NP_730248.2 FtsH_ext 163..259 CDD:284011 50/98 (51%)
FtsH_fam 271..764 CDD:273520 367/495 (74%)
AAA 365..496 CDD:278434 115/130 (88%)
Peptidase_M41 580..762 CDD:279742 128/181 (71%)
Afg3l2NP_081406.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 76..124 21/81 (26%)
FtsH_ext 145..241 CDD:284011 50/98 (51%)
FtsH_fam 252..745 CDD:273520 367/496 (74%)
AAA 344..475 CDD:278434 115/130 (88%)
Peptidase_M41 561..743 CDD:279742 128/181 (71%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 759..802 23/39 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 268 1.000 Domainoid score I1848
eggNOG 1 0.900 - - E1_COG0465
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4947
Inparanoid 1 1.050 911 1.000 Inparanoid score I368
Isobase 1 0.950 - 0 Normalized mean entropy S505
OMA 1 1.010 - - QHG57866
OrthoDB 1 1.010 - - D119497at33208
OrthoFinder 1 1.000 - - FOG0001522
OrthoInspector 1 1.000 - - otm42340
orthoMCL 1 0.900 - - OOG6_100384
Panther 1 1.100 - - O PTHR43655
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2012
SonicParanoid 1 1.000 - - X961
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.820

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