DRSC/TRiP Functional Genomics Resources

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Protein Alignment Afg3l2 and PSMC3

DIOPT Version :10

Sequence 1:NP_730248.2 Gene:Afg3l2 / 39922 FlyBaseID:FBgn0036702 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_002795.2 Gene:PSMC3 / 5702 HGNCID:9549 Length:439 Species:Homo sapiens


Alignment Length:413 Identity:140/413 - (33%)
Similarity:200/413 - (48%) Gaps:69/413 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 KEISWKEFVNS---YLSKGVVEKLEVVNKKWVRVRLQQNSNSGSGVLWFNIGSVDSFERNLEAAQ 247
            ||.|.|..||.   ||...|:|.|:|          ..|.....|.   || .:|| :|..:.|.
Human    74 KENSEKIKVNKTLPYLVSNVIELLDV----------DPNDQEEDGA---NI-DLDS-QRKGKCAV 123

  Fly   248 TEQGTESINFVPVIYRNEVEAASLTGLLPTLLIIGFLVYMMRKSADMMGGGRGRKGGGLFGGVMQ 312
            .:..|....|:|||  ..|:|..|                              |.|.|.|....
Human   124 IKTSTRQTYFLPVI--GLVDAEKL------------------------------KPGDLVGVNKD 156

  Fly   313 STAKL-TNPNEIGVGFK-------------DVAGCEEAKIEIMEFVNF-LKNPQQYIDLGAKIPK 362
            |...| |.|.|.....|             |:.|.::...|::|.:.. :.:.:::.:||.:.||
Human   157 SYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPK 221

  Fly   363 GAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFAMARKHAPCILFID 427
            |.::.|||||||||||:|.|.:....|:.::|.:.::||:|.|...|||.||:|::.||.|:|||
Human   222 GVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFID 286

  Fly   428 EIDAVGRKRGGKTFGGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDILDKALMRPGRFDRQ 492
            |:||:|.||......|..|.:.|:.:||.::|||...|.|.|:||||||||||.||:|.||.||:
Human   287 ELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRK 351

  Fly   493 IYVPAPDIKGRASIFKVHLGNLKTSLDKNELSRKMAALTPGFTGADIANVCNEAALIAARDSKDS 557
            |..|.|:.:.||.|.::|...:..|.|.|  ..::|..|..|.||....||.||.:||.|.....
Human   352 IEFPMPNEEARARIMQIHSRKMNVSPDVN--YEELARCTDDFNGAQCKAVCVEAGMIALRRGATE 414

  Fly   558 IVLKHFEQAIERVIAGMEKKTNV 580
            :..:.:.:.|..|.|  :||.|:
Human   415 LTHEDYMEGILEVQA--KKKANL 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Afg3l2NP_730248.2 HflB 168..765 CDD:440233 140/413 (34%)
PSMC3NP_002795.2 PRK03992 39..432 CDD:179699 137/408 (34%)

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