DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Afg3l2 and PSMC2

DIOPT Version :10

Sequence 1:NP_730248.2 Gene:Afg3l2 / 39922 FlyBaseID:FBgn0036702 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_002794.1 Gene:PSMC2 / 5701 HGNCID:9548 Length:433 Species:Homo sapiens


Alignment Length:254 Identity:110/254 - (43%)
Similarity:156/254 - (61%) Gaps:5/254 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   325 VGFKDVAGCEEAKIEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVP 388
            |.:.||.||:|...::.|.|.. |.:|:::::||.:.|||.:|.|||||||||.|:|.|...:..
Human   172 VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDAC 236

  Fly   389 FITVSGSEFLEMFVGVGPSRVRDMFAMARKHAPCILFIDEIDAVGRKRGGKTFGGHSEQENTLNQ 453
            ||.|.|||.::.:||.|...||::|.|||....|::|.|||||:|..|.....||.:|.:.|:.:
Human   237 FIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLE 301

  Fly   454 LLVEMDGFNTTTNVVVLAATNRVDILDKALMRPGRFDRQIYVPAPDIKGRASIFKVHLGNLKTSL 518
            |:.::|||:...|:.||.||||.|.||.|||||||.||:|....||::||..|||:|..::....
Human   302 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVER 366

  Fly   519 D-KNELSRKMAALTPGFTGADIANVCNEAALIAARDSKDSIVLKHFEQAIERVIAGMEK 576
            | :.||   :|.|.|..|||:|.:||.||.:.|.|..:.....|.|.:|:.:||....|
Human   367 DIRFEL---LARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAK 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Afg3l2NP_730248.2 HflB 168..765 CDD:440233 110/254 (43%)
PSMC2NP_002794.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
PRK03992 44..430 CDD:179699 110/254 (43%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.