DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6512 and afg3l2

DIOPT Version :9

Sequence 1:NP_730248.2 Gene:CG6512 / 39922 FlyBaseID:FBgn0036702 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_001104667.1 Gene:afg3l2 / 569168 ZFINID:ZDB-GENE-070912-46 Length:800 Species:Danio rerio


Alignment Length:833 Identity:509/833 - (61%)
Similarity:589/833 - (70%) Gaps:74/833 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAFRLLGTAKTMAGMMRRNYTAGSLPG-KGQRTHMGATGAGVYILPTELSPLLRYVVKQIQLLCK 64
            ||.|.|..::..     ||.....||. :.........|.|..:|  :...||..|:...:.|..
Zfish     1 MAHRYLHLSRGC-----RNLLHTLLPNVRSTNRFQSVQGVGQIVL--DRRSLLSQVLGTYRRLSS 58

  Fly    65 KPPKGFEKYFEAGGKSSGQPKGSVGDKKPPAGSSKSASEKPSTSTPASVKPSRSQTDAKSDWNFG 129
            ||||||||||.  ...:|.||.|              ...||.:.....||              
Zfish    59 KPPKGFEKYFP--NNKNGGPKNS--------------EPTPSNAEVKEAKP-------------- 93

  Fly   130 MFSNSSRGPAGKGGNSLGGRPLGENGGGGDRERW------------------ILLGAIGAVVLVG 176
              :||.:...|.||.|.||   |:.||..|...|                  ..||.....:.:|
Zfish    94 --TNSQKTTGGGGGGSSGG---GKRGGRKDESTWQSRIQKGEFPWDDKEFRMYFLGGTAFWLAMG 153

  Fly   177 SFAFFEMGYKEISWKEFVNSYLSKGVVEKLEVVNKKWVRVRLQQNSNSGSG-VLWFNIGSVDSFE 240
            .:.|...|.:|::||:||||||:||||::||||||::|:|..........| .:||||||||:||
Zfish   154 YYFFIRDGGREVTWKDFVNSYLAKGVVDRLEVVNKRYVKVIFTPGKTPVDGQYVWFNIGSVDTFE 218

  Fly   241 RNLEAAQTEQGTESINFVPVIYRNEVEAASLTGLLPTLLIIGFLVYMMRKSADMMGGGR-GRKGG 304
            ||||.||.|.|.|..|.:||:|..|.:.:.|..:|||:||||||::|:|:..  .|.|| ||..|
Zfish   219 RNLETAQLELGIEGENRLPVVYSAESDGSFLLSMLPTVLIIGFLLFMLRRGP--AGAGRPGRGMG 281

  Fly   305 GLFGGVMQSTAKLTNPNEIGVGFKDVAGCEEAKIEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGP 369
            ||| .|.::|||:.. :||.|.|||||||||||:||||||||||||:||.||||||||||:||||
Zfish   282 GLF-SVSETTAKVLR-DEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGP 344

  Fly   370 PGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFAMARKHAPCILFIDEIDAVGR 434
            |||||||||||||||||||||||:|||||||||||||:||||:|.:|||:|||||||||||||||
Zfish   345 PGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFVLARKNAPCILFIDEIDAVGR 409

  Fly   435 KRGGKTFGGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDILDKALMRPGRFDRQIYVPAPD 499
            |||...|||.|||||||||||||||||||.|||||||.|||.||||.|||||||||||||:..||
Zfish   410 KRGRGNFGGQSEQENTLNQLLVEMDGFNTATNVVVLAGTNRPDILDPALMRPGRFDRQIYIGPPD 474

  Fly   500 IKGRASIFKVHLGNLK--TSLDKNELSRKMAALTPGFTGADIANVCNEAALIAARDSKDSIVLKH 562
            ||||||||||||..||  ..|||..|:||||||||||:|||||||||||||||||...|:|..||
Zfish   475 IKGRASIFKVHLRPLKLEAELDKEALARKMAALTPGFSGADIANVCNEAALIAARHLSDAINQKH 539

  Fly   563 FEQAIERVIAGMEKKTNVLAPEEKRTVAHHEAGHAVAGWFLEHADPLLKVSIIPRGKGLGYAQYL 627
            |||||||||.|:||||.||.||||:|||:||||||||||||||||||||||||||||||||||||
Zfish   540 FEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWFLEHADPLLKVSIIPRGKGLGYAQYL 604

  Fly   628 PKDHYLLSKEQLFDRMCMTLGGRVAEELFFNRITTGAQDDLKKITDIAYSQVVRFGMNEKVGQVS 692
            ||:.||.:||||.|||||||||||:||:||.||||||||||||:|..||:|:|:|||||||||||
Zfish   605 PKEQYLYTKEQLLDRMCMTLGGRVSEEIFFGRITTGAQDDLKKVTQSAYAQIVQFGMNEKVGQVS 669

  Fly   693 FDVGQAGDPVFSKPYSEDTAQLIDNEVRSIIKCAHEATTSLLTKHKENVQKVAERLLQNEVLSRD 757
            ||:.:.|:.|..|||||.||:|||.|||::|..|:|.|..||:..|..|:|||.|||:.|||.::
Zfish   670 FDLPRQGELVLEKPYSEATARLIDTEVRNLISTAYERTQQLLSDKKPEVEKVALRLLEKEVLDKN 734

  Fly   758 DMIELLGPRPFKEKSTYEEFVEGTGSFEEDTTLPEGLKSWNKEK-----ERTE 805
            ||:||||.|||.||||||||||||||.:|||:||||||.||||:     |.||
Zfish   735 DMVELLGKRPFAEKSTYEEFVEGTGSVDEDTSLPEGLKDWNKERGSEKEESTE 787

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6512NP_730248.2 FtsH_ext 163..259 CDD:284011 48/114 (42%)
FtsH_fam 271..764 CDD:273520 377/495 (76%)
AAA 365..496 CDD:278434 115/130 (88%)
Peptidase_M41 580..762 CDD:279742 132/181 (73%)
afg3l2NP_001104667.1 FtsH_ext 141..237 CDD:284011 47/95 (49%)
FtsH_fam 248..741 CDD:273520 377/496 (76%)
AAA 340..471 CDD:278434 115/130 (88%)
Peptidase_M41 557..739 CDD:279742 132/181 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 274 1.000 Domainoid score I1741
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4947
Inparanoid 1 1.050 916 1.000 Inparanoid score I354
OMA 1 1.010 - - QHG57866
OrthoDB 1 1.010 - - D119497at33208
OrthoFinder 1 1.000 - - FOG0001522
OrthoInspector 1 1.000 - - otm25934
orthoMCL 1 0.900 - - OOG6_100384
Panther 1 1.100 - - O PTHR43655
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2012
SonicParanoid 1 1.000 - - X961
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1313.010

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