Protein Alignment Afg3l2 and psmc6

DIOPT Version :10

• Sequence 1: NP_730248.2
• Gene: Afg3l2 / 39922
• FlyBaseID: FBgn0036702
• Length: 826
• Species: Drosophila melanogaster
• Sequence 2: NP_989342.1
• Gene: psmc6 / 394968
• XenbaseID: XB-GENE-978099
• Length: 389
• Species: Xenopus tropicalis
• Alignment Length: 249
• Identity: 99/249 - (39%)
• Similarity: 149/249 - (59%)
• Gaps: 7/249 - (2%)

  Fly   325 VGFKDVAGCEEAKIEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVP 388
            |.:.::.|..|...|:.|.:.. |.||:.:..:|...|||.:|.|||||||||||:|.|.:.:..
 Frog   130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCN 194

  Fly   389 FITVSGSEFLEMFVGVGPSRVRDMFAMARKHAPCILFIDEIDAVGRKRGGKTFGGHSEQENTLNQ 453
            |:.|..|..::.::|.....:|:||..||.|.|||:|:|||||:|.:|..:......|.:.||.:
 Frog   195 FLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLME 259

  Fly   454 LLVEMDGFNTTTNVVVLAATNRVDILDKALMRPGRFDRQIYVPAPDIKGRASIFKVHLGNLKT-- 516
            ||.:||||:|...|.::.||||.|.||.||:||||.||:|::..|:.:.|..|.|:|.|.:..
 Frog   260 LLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIELPNEQARLDILKIHAGPITKHG 324

  Fly   517 SLDKNELSRKMAALTPGFTGADIANVCNEAALIAARDSKDSIVLKHFEQAIERV 570
            .:|...:.:    |:.||.|||:.|||.||.:.|.|..:|.:|.:.|.:|:.:|
 Frog   325 EIDYEAIVK----LSDGFNGADLRNVCTEAGMFAIRADRDFVVQEDFMKAVRKV 374

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Afg3l2	NP_730248.2	HflB	168..765	CDD:440233	99/249 (40%)
psmc6	NP_989342.1	PRK03992	5..379	CDD:179699	99/249 (40%)