DRSC/TRiP Functional Genomics Resources

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Protein Alignment Afg3l2 and Y47C4A.1

DIOPT Version :10

Sequence 1:NP_730248.2 Gene:Afg3l2 / 39922 FlyBaseID:FBgn0036702 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_001362034.1 Gene:Y47C4A.1 / 189973 WormBaseID:WBGene00021615 Length:388 Species:Caenorhabditis elegans


Alignment Length:432 Identity:178/432 - (41%)
Similarity:239/432 - (55%) Gaps:91/432 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   322 EIGVGFKDVAGCEEAKIEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEAN 386
            ::.:.|||||||.|||:||.|||::||||.::.                                
 Worm    26 QLKIKFKDVAGCSEAKVEIREFVDYLKNPGRFT-------------------------------- 58

  Fly   387 VPFITVSGSEFLEMFVGVGPSRVRDMFAMARKHAPCILFIDEIDAVGRKRGGKTFGGHSEQENTL 451
                           ||:.                                    ||..|:|.||
 Worm    59 ---------------VGIS------------------------------------GGSGEEEQTL 72

  Fly   452 NQLLVEMDGFNTTTN-VVVLAATNRVDILDKALMRPGRFDRQIYVPAPDIKGRASIFKVHLGNLK 515
            ||||||||...:... |||||:|||.|:|||||:|||||||.|.:..|.:..|..:|::::..:|
 Worm    73 NQLLVEMDRMGSGNGAVVVLASTNRADVLDKALLRPGRFDRHISIDLPTVLERKDMFELYMRKIK 137

  Fly   516 TSLDKNELSRKMAALTPGFTGADIANVCNEAALIAARDSKDSIVLKHFEQAIERVIAGMEKKTNV 580
            ......|.|:::|.|||.||||||.|||||:|:.||.:....:.:|..|.|::||:||.||::..
 Worm   138 LDHAPQEYSQRLAVLTPSFTGADIMNVCNESAIRAASNKCHVVTIKDMEYALDRVLAGSEKRSRS 202

  Fly   581 LAPEEKRTVAHHEAGHAVAGWFLEHADPLLKVSIIPR-GKGLGYAQYLPK-DHYLLSKEQLFDRM 643
            |..||:..||:||||||:.||.|||.|.||||:|||: ...||:|||.|: |.:|.||::|||||
 Worm   203 LVEEEREVVAYHEAGHALVGWMLEHTDALLKVTIIPQTSAALGFAQYSPRDDKHLYSKDELFDRM 267

  Fly   644 CMTLGGRVAEELFFNRITTGAQDDLKKITDIAYSQVVRFGMNEKVGQVSFDVGQAGDPVFS-KPY 707
            ||.||||.||.|.|.|||:||||||:|:|..||:||..:||:..||.:||...:.    |. |||
 Worm   268 CMMLGGRCAENLKFGRITSGAQDDLQKMTKSAYAQVKLYGMSSIVGPLSFPNTER----FQIKPY 328

  Fly   708 SEDTAQLIDNEVRSIIKCAHEATTSLLTKHKENVQKVAERLL 749
            .:..|...|.|...|:..|:||||.|:..:.:.::.|..|||
 Worm   329 LKKFASTFDQEATLIVAKANEATTDLIKNNMDKLETVCARLL 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Afg3l2NP_730248.2 HflB 168..765 CDD:440233 178/432 (41%)
Y47C4A.1NP_001362034.1 HflB <24..370 CDD:440233 176/430 (41%)

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