Protein Alignment Afg3l2 and rpt-6

DIOPT Version :10

• Sequence 1: NP_730248.2
• Gene: Afg3l2 / 39922
• FlyBaseID: FBgn0036702
• Length: 826
• Species: Drosophila melanogaster
• Sequence 2: NP_499609.1
• Gene: rpt-6 / 176661
• WormBaseID: WBGene00004506
• Length: 416
• Species: Caenorhabditis elegans
• Alignment Length: 246
• Identity: 111/246 - (45%)
• Similarity: 160/246 - (65%)
• Gaps: 3/246 - (1%)

  Fly   327 FKDVAGCEEAKIEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFI 390
            ::.|.|.::...||.|.:.. :|:|:.:..||...|||.:|.|||||||||||:|.|......||
 Worm   158 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVAHHTECTFI 222

  Fly   391 TVSGSEFLEMFVGVGPSRVRDMFAMARKHAPCILFIDEIDAVGRKRGGKTFGGHSEQENTLNQLL 455
            .|||||.::.|:|.|...||::|.|||:|||.|:|:||||::|..|...:.||.||.:.|:.:||
 Worm   223 RVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELL 287

  Fly   456 VEMDGFNTTTNVVVLAATNRVDILDKALMRPGRFDRQIYVPAPDIKGRASIFKVHLGNLKTSLDK 520
            .::|||..|.|:.|:.||||:||||.||:||||.||:|..||||.|.||.|.|:|  :.|.:|.:
 Worm   288 NQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPAPDEKARADILKIH--SRKMNLMR 350

  Fly   521 NELSRKMAALTPGFTGADIANVCNEAALIAARDSKDSIVLKHFEQAIERVI 571
            .....|:|...||.:||::.:||.||.:.|.|:.:..:..:.||.|:.:|:
 Worm   351 GINMAKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQEDFEMAVGKVM 401

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Afg3l2	NP_730248.2	HflB	168..765	CDD:440233	111/246 (45%)
rpt-6	NP_499609.1	PRK03992	52..410	CDD:179699	111/246 (45%)