DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6512 and ymel-1

DIOPT Version :9

Sequence 1:NP_730248.2 Gene:CG6512 / 39922 FlyBaseID:FBgn0036702 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_001366715.1 Gene:ymel-1 / 176460 WormBaseID:WBGene00010842 Length:723 Species:Caenorhabditis elegans


Alignment Length:761 Identity:255/761 - (33%)
Similarity:377/761 - (49%) Gaps:148/761 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 NFGMFSNSSRGPAGKGGNSLGGRPLGENGGGGDRERWILLGAIGAVVLVGSFAFFEMGYKEISWK 191
            |.|:..||.        |.:..:||.                     :..:.|.....|.:: |:
 Worm    15 NTGLLRNSR--------NGINRKPLD---------------------IEATAASLSRVYHQV-WR 49

  Fly   192 EF---------VN--------SYLSKGVVEKLEV-------------------VNKKWVRVRLQ- 219
            :|         :|        |.||:.:..|.|:                   :.::..|.|.| 
 Worm    50 QFSSDTSSPVTINQMNNILRDSTLSRRIARKSEISLNYDDAVVRIIPASSSFYIQRRGFRTRKQT 114

  Fly   220 -----------------------------QNSNSGSGVLWFNIGSVDSFERNL-EAAQTEQGTES 254
                                         |.::.|....|      :.:|.:| :..:.:|.|.:
 Worm   115 FGVGNAGKPTQDEVKSPLTYFSELLAGKKQKTSEGGVEKW------NQYESDLKKLPENQQRTYT 173

  Fly   255 INFVPVIYRNEVEAASLTG-----LLPTLLIIGFLVYMMRKSADMMGGGRGRKGGGLFGGVMQST 314
            ..||..:..|.|..|...|     |....:.:.|.::.    ..:.|..|.|.|....|.:..|.
 Worm   174 DGFVKGLLSNGVSGAGKDGKKSNTLTRFYIFLVFCIFF----GYLTGRIRVRVGDRQIGSLFFSN 234

  Fly   315 AKLTNPNEIGVGFKDVAGCEEAKIEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAK 379
            .:..||.::.|.|.||.|.:|||:|:.|.|::||:|::|..||.::|||.:|.|||||||||||:
 Worm   235 PQEVNPEDVQVTFDDVRGMDEAKLEVEEIVDYLKDPEKYSRLGGRLPKGVLLVGPPGTGKTLLAR 299

  Fly   380 ATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFAMARKHAPCILFIDEIDAVGRKRGGKTFGGH 444
            |.||||.|||...:||||.|:.||.|..||||:|..|:..||||:||||||:||.||...:.  |
 Worm   300 AIAGEAQVPFFHTAGSEFDEVLVGQGARRVRDLFDKAKARAPCIIFIDEIDSVGSKRVSNSI--H 362

  Fly   445 SEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDILDKALMRPGRFDRQIYVPAPDIKGRASIFKV 509
            .....|:||||.|||||.....::|:|||||||.|||||:||||||.::.||.||:.||..||..
 Worm   363 PYANQTINQLLSEMDGFTRNEGIIVIAATNRVDDLDKALLRPGRFDVRVTVPKPDLAGRVDIFNF 427

  Fly   510 HLGNLKTS--LDKNELSRKMAALTPGFTGADIANVCNEAALIAARDSKDSIVLKHFEQAIERVIA 572
            :|..:..|  :|...|::.    :.|||||||.|:.|:|||.||.|:...:.:.:.::|.:||:.
 Worm   428 YLSKIVHSGGIDPKVLAKG----STGFTGADIENMVNQAALKAATDNAVEVTMAYLDEARDRVLM 488

  Fly   573 GMEKKTNVLAPEEK--RTVAHHEAGHAVAGWFLEHADPLLKVSIIPRGKGLGYAQYLP-KDHYLL 634
            | ..:|....|:|:  |..|:|||||.:...:.:.|.||.||:|||||:.||:...|| ||.|.|
 Worm   489 G-PARTGGRIPDEEANRNTAYHEAGHTLVSLYTKDATPLHKVTIIPRGQSLGHTAMLPEKDSYQL 552

  Fly   635 SKEQLFDRMCMTLGGRVAEELFF--NRITTGAQDDLKKITDIAYSQVVRFGMNEKVGQVSFDVGQ 697
            :|.|:...:.:.:||||||||.|  :::||||.|||.|.|.:|...|..|||::|||...| ..|
 Worm   553 TKAQMLATLDVMMGGRVAEELIFGDDKVTTGAADDLSKATQLAVQMVKVFGMSDKVGLRDF-TAQ 616

  Fly   698 AGDPVFSK--PYSEDTAQLIDNEVRSIIKCAHEATTSLLTKHKENVQKVAERLLQNEVLSRDDMI 760
            ..:....|  ..:..||:|||.|:..:::.:::....:|...|:..|.:||.||:.|.||.|::.
 Worm   617 DNESALVKVSDLAPQTAELIDAEINRVLQESYKRAKVILETKKKEHQLLAEALLEYETLSADEVK 681

  Fly   761 ELLGPRPFKEKSTYEEFVEGTGSFEEDTTLPEGLKSWNKEKERTEP 806
            .::..:..|..:                  |..:|..| |.:|.:|
 Worm   682 RVISGQKIKRPT------------------PAAVKKSN-ETKRNQP 708

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6512NP_730248.2 FtsH_ext 163..259 CDD:284011 21/162 (13%)
FtsH_fam 271..764 CDD:273520 216/506 (43%)
AAA 365..496 CDD:278434 78/130 (60%)
Peptidase_M41 580..762 CDD:279742 75/188 (40%)
ymel-1NP_001366715.1 FtsH_fam 195..685 CDD:273520 215/501 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0465
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D217929at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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