Protein Alignment Afg3l2 and rpt-4

DIOPT Version :10

• Sequence 1: NP_730248.2
• Gene: Afg3l2 / 39922
• FlyBaseID: FBgn0036702
• Length: 826
• Species: Drosophila melanogaster
• Sequence 2: NP_001022113.1
• Gene: rpt-4 / 173384
• WormBaseID: WBGene00004504
• Length: 406
• Species: Caenorhabditis elegans
• Alignment Length: 414
• Identity: 118/414 - (28%)
• Similarity: 195/414 - (47%)
• Gaps: 85/414 - (20%)

  Fly   194 VNSYLSK-----GVVEKLEVVNKKWVRVRLQQNSNSGSGVLWFNIGSV----------DSF---- 239
            :|||..|     .:.:||:.:.||...:..|.:.:........::|.:          :.|
 Worm    26 LNSYRRKLAECRDIEQKLKDLRKKESEMTKQFDKSENDIKSLQSVGQIVGEVLKQLSEEKFIVKA 90

  Fly   240 ----------ERNLEAAQTEQGTESINFVPVIYRNEVEAASLTGLLPTLLIIGFLVYMMRKSADM 294
                      .|::...:.:|||          |..::..:||.:......:..|||
 Worm    91 TNGPRYVVGCRRSINKEELKQGT----------RVSLDMTTLTIMRQLPREVDPLVY-------- 137

  Fly   295 MGGGRGRKGGGLFGGVMQSTAKLTNPNEIGVGFKDVAGCEEAKIEIMEFVNF-LKNPQQYIDLGA 358
                                 |:::.:...:.:.||.|..|...|:.|.|.. |.||:.:..:|.
 Worm   138 ---------------------KMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGI 181

  Fly   359 KIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFAMARKHAPCI 423
            ..|||.:|.|||||||||||:|.|.:.:..|:.|..|..::.::|.....:|:||..||.|.|||
 Worm   182 TPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCI 246

  Fly   424 LFIDEIDAVGRKRGGKTFGGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDILDKALMRPGR 488
            :|:|||||:|.:|..:......|.:.||.:||.::|||::...|.|:.||||.|.||.||:||||
 Worm   247 VFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGR 311

  Fly   489 FDRQIYVPAPDIKGRASIFKVHLGNLKTSLDKNELSR-------KMAALTPGFTGADIANVCNEA 546
            .||:|.:..|:.:.|..|.|:|         .|::::       .:..|:.||:.||:.|||.||
 Worm   312 LDRKIEIGLPNEQSRLEILKIH---------SNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEA 367

  Fly   547 ALIAARDSKDSIVLKHFEQAIERV 570
            .:.|.|..::.::.:.|.:|:.:|
 Worm   368 GMFAIRAEREFVIDEDFMKAVRKV 391

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Afg3l2	NP_730248.2	HflB	168..765	CDD:440233	118/414 (29%)
rpt-4	NP_001022113.1	PRK03992	21..391	CDD:179699	117/412 (28%)