Protein Alignment Afg3l2 and rpt-5

DIOPT Version :10

• Sequence 1: NP_730248.2
• Gene: Afg3l2 / 39922
• FlyBaseID: FBgn0036702
• Length: 826
• Species: Drosophila melanogaster
• Sequence 2: NP_491672.1
• Gene: rpt-5 / 172238
• WormBaseID: WBGene00004505
• Length: 430
• Species: Caenorhabditis elegans
• Alignment Length: 388
• Identity: 125/388 - (32%)
• Similarity: 202/388 - (52%)
• Gaps: 40/388 - (10%)

  Fly   197 YLSKGVVEKLEVVNKKWVRVRLQQNSNSGSGVLWFNIGSVDSFERNLEAAQTEQGTESINFVPVI 261
            ||...|||.|:          |:.|:....       .:||...:..:.|..:..|.:..|:||:
 Worm    81 YLVSNVVELLD----------LEDNTEEEG-------ANVDLDAQKTKCAVIKTSTRATYFLPVV 128

  Fly   262 YRNEVEAASLTGLL-PTLLIIGFLVYMMRKSADMMGGGRGRKGGGLFGGVMQSTAKLTNPNEIGV 325
                       ||: |..|..|.||.:.:.|..::     .|....:...:::......|.|
 Worm   129 -----------GLVDPDELKPGDLVGVNKDSYLIL-----EKLPAEYDSRVKAMEVDERPTE--- 174

  Fly   326 GFKDVAGCEEAKIEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPF 389
            .:.|:.||::...|::|.|.. :.:..::::||...|||.::.||||||||::|:|.|.:....|
 Worm   175 QYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQTKSTF 239

  Fly   390 ITVSGSEFLEMFVGVGPSRVRDMFAMARKHAPCILFIDEIDAVGRKRGGKTFGGHSEQENTLNQL 454
            :.::|.:.::||:|.|...|||.||:|::.||.|:||||:||:|.||......|..|.:.|:.:|
 Worm   240 LKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 304

  Fly   455 LVEMDGFNTTTNVVVLAATNRVDILDKALMRPGRFDRQIYVPAPDIKGRASIFKVHLGNLKTSLD 519
            |.::|||....::.|:|||||:|:||.||:|.||.||:|.:|.|:...||.|.::|  :.|.:::
 Worm   305 LNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDARARIMQIH--SRKMNVN 367

  Fly   520 KNELSRKMAALTPGFTGADIANVCNEAALIAARDSKDSIVLKHFEQAIERVIAGMEKKTNVLA 582
            |:....::|..|..|.||....||.||.:||.|.....|:.:.|..||..|.|..:...|..|
 Worm   368 KDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRDATEILHEDFMDAILEVQAKKKASLNYYA 430

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Afg3l2	NP_730248.2	HflB	168..765	CDD:440233	125/388 (32%)
rpt-5	NP_491672.1	PRK03992	32..423	CDD:179699	123/379 (32%)