DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Afg3l2 and Rpt4

DIOPT Version :10

Sequence 1:NP_730248.2 Gene:Afg3l2 / 39922 FlyBaseID:FBgn0036702 Length:826 Species:Drosophila melanogaster
Sequence 2:XP_321726.5 Gene:Rpt4 / 1281769 VectorBaseID:AGAMI1_012379 Length:392 Species:Anopheles gambiae


Alignment Length:86 Identity:21/86 - (24%)
Similarity:32/86 - (37%) Gaps:13/86 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 QFPTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQPPPEGRLPDATKGCDHLRDVFAKQMGL 151
            ::|..:...||...|:..:..||.|.:        .|..|.......|.....||.:.:....|.
Mosquito   301 KWPQATPDPFHTYLGLCGLAFTGEPGL--------SPVNPSLNMSMAAYAHLQHLHEQWRSADGR 357

  Fly   152 SDKDIVALSGAHTLGRCHKDR 172
            .|:||     :|..|:.||.|
Mosquito   358 GDEDI-----SHNDGKPHKAR 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Afg3l2NP_730248.2 HflB 168..765 CDD:440233 3/5 (60%)
Rpt4XP_321726.5 PRK03992 7..381 CDD:179699 21/86 (24%)

Return to query results.
Submit another query.