Protein Alignment Rbp6 and NPL3

DIOPT Version :10

• Sequence 1: NP_001097631.1
• Gene: Rbp6 / 39919
• FlyBaseID: FBgn0260943
• Length: 499
• Species: Drosophila melanogaster
• Sequence 2: NP_010720.3
• Gene: NPL3 / 852042
• SGDID: S000002840
• Length: 414
• Species: Saccharomyces cerevisiae
• Alignment Length: 210
• Identity: 41/210 - (19%)
• Similarity: 70/210 - (33%)
• Gaps: 64/210 - (30%)

  Fly     6 EQQQQQQQVELGPCSPSEVPNDPG--------------------KMFIGGLSWQTSPESLRDYFG 50
            |..|..|..|..|..|   |..||                    ::|:...........|.:.||
Yeast    85 EAHQHHQPPEPQPYYP---PPPPGEHMHGRPPMHHRQEGELSNTRLFVRPFPLDVQESELNEIFG 146

  Fly    51 RYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPRR----AHP 111
            .:|.:.|..::        .||.||.|.:..|..|.:    .|:.||      :|..:    .:.
Yeast   147 PFGPMKEVKIL--------NGFAFVEFEEAESAAKAI----EEVHGK------SFANQPLEVVYS 193

  Fly   112 KMVTRTKKIFVGGLSAPTTLEDVKSYFEQ------FGPIEDAMLMFDKQTNRHRGFGFVTFQSED 170
            |:..:..:|.:..|....:.:|:|....:      |..:         .|....|.|.:.|.||:
Yeast   194 KLPAKRYRITMKNLPEGCSWQDLKDLARENSLETTFSSV---------NTRDFDGTGALEFPSEE 249

  Fly   171 VVDKVCEIHFHEINN 185
            ::.:..|    .:||
Yeast   250 ILVEALE----RLNN 260

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp6	NP_001097631.1	RRM1_MSI	30..105	CDD:409990	16/74 (22%)
		RRM2_MSI	119..192	CDD:240769	14/73 (19%)
NPL3	NP_010720.3	PHA03247	<11..87	CDD:223021	1/1 (100%)
		RBD_RRM1_NPL3	126..192	CDD:409777	17/83 (20%)
		RRM2_SRSF1_4_like	200..271	CDD:409776	14/74 (19%)