Protein Alignment Rbp6 and AT1G78260

DIOPT Version :10

• Sequence 1: NP_001097631.1
• Gene: Rbp6 / 39919
• FlyBaseID: FBgn0260943
• Length: 499
• Species: Drosophila melanogaster
• Sequence 2: NP_565175.1
• Gene: AT1G78260 / 844161
• AraportID: AT1G78260
• Length: 287
• Species: Arabidopsis thaliana
• Alignment Length: 307
• Identity: 79/307 - (25%)
• Similarity: 115/307 - (37%)
• Gaps: 79/307 - (25%)

  Fly   115 TRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSED-----VVDK 174
            |...|:|||||:..|..::::.||||||.|.:|:::.||.|.:.:|:|||||:..|     |.|.
plant    14 TTYTKVFVGGLAWETPTDEMRRYFEQFGEILEAVIITDKNTGKSKGYGFVTFRESDSATRAVADP 78

  Fly   175 VCEIHFHEINNKMVECKKAQPKEVMLPANLA---KTRAAGRSAYGELVVWGSSHAHSTAATSAAA 236
                      |.:::.:||.       .|:|   :.|.:.....|:.   ||...:.:...|...
plant    79 ----------NPVIDGRKAN-------CNIASFGRPRPSPPRGRGQT---GSPSQYQSGGPSTYT 123

  Fly   237 AGLLPSSLAAAASVLQQQ------------QQQQQQQQQQQQQQQQHHQQLHHTHPQSPAHSHAH 289
            ....|...|||..::...            .|.....|.||.|..|..|||:.....||:.|.|
plant   124 GMAAPLPPAAAPQLMYPSYGYTYNPDQFGYHQALYNTQLQQAQYYQQQQQLYGGGATSPSSSGA- 187

  Fly   290 HPHTHSHSQLLGSLRYTPYPLPAHLSAAAVVVAQQQHHHQQQQQQQQQQQQQQ------------ 342
                    .::.|..|..|.|.|..      |..|.|||..|....||...|:
plant   188 --------TIMPSPYYYGYSLQAPR------VPYQHHHHLPQPYNPQQHHHQRFSSPSFLVYPSN 238

  Fly   343 ------VVAAQQQHQQQQSLAQVVAAAAGAAPGLLPLANPAPPATPS 383
                  :........:.:::.|.|.||.|.|      ...||..|.|
plant   239 SSFAPPLQGVLSSSTESEAVPQQVPAAEGEA------TTTAPEITTS 279

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp6	NP_001097631.1	RRM1_MSI	30..105	CDD:409990
		RRM2_MSI	119..192	CDD:240769	28/77 (36%)
AT1G78260	NP_565175.1	RRM_RBM24_RBM38_like	17..92	CDD:409818	31/91 (34%)