Protein Alignment Rbp6 and UBP1A

DIOPT Version :10

• Sequence 1: NP_001097631.1
• Gene: Rbp6 / 39919
• FlyBaseID: FBgn0260943
• Length: 499
• Species: Drosophila melanogaster
• Sequence 2: NP_849806.1
• Gene: UBP1A / 841846
• AraportID: AT1G54080
• Length: 430
• Species: Arabidopsis thaliana
• Alignment Length: 527
• Identity: 111/527 - (21%)
• Similarity: 186/527 - (35%)
• Gaps: 169/527 - (32%)

  Fly     3 IKIEQQQQQQQVE--------------------LGPCSPSEVPN---DPG-------KMFIGGLS 37
            ||.:|||||||.:                    :.|.....:|:   .||       .::.|.:.
plant     7 IKQQQQQQQQQHQQAMIQQAMMQQHPSLYHPGVMAPPQMEPLPSGNLPPGFDPTTCRSVYAGNIH 71

  Fly    38 WQTSPESLRDYFGRYGDISEA-MVMKDPTTRRSRGFGFVTFSDPNSVD-KVLTQGTHELDGK--K 98
            .|.:...|::.|...|.|... ::.||.::     :|||.:.|..... .::|.....:.|:  |
plant    72 TQVTEILLQEIFASTGPIESCKLIRKDKSS-----YGFVHYFDRRCASMAIMTLNGRHIFGQPMK 131

  Fly    99 VDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGP----IEDAMLMFDKQTNRHR 159
            |:...|..:|   :..:....||||.||...|...:...|..|..    ..||.:|:|::|.|.|
plant   132 VNWAYATGQR---EDTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCSSYYRDARVMWDQKTGRSR 193

  Fly   160 GFGFVTFQS-EDVVDKVCEIHFHEINNKMVECKKAQPKEVMLPANLAKTRAAGRSAYGELVVWGS 223
            |||||:|:: :|....:.|::...::::.:.|..|             |:.|   .:||
plant   194 GFGFVSFRNQQDAQTAINEMNGKWVSSRQIRCNWA-------------TKGA---TFGE------ 236

  Fly   224 SHAHSTAATSAAAAGLLPSSLAAAASVLQQQQQQQQQQQQQQQQQQQHHQQLHHTHPQ------- 281
             ..||:...|..       .|...:|               :..::..::.....:||
plant   237 -DKHSSDGKSVV-------ELTNGSS---------------EDGRELSNEDAPENNPQFTTVYVG 278

  Fly   282 --SPAHSHAHHPHTHSHSQL-LGSLRYTPYPLPAHLSAAAVVVAQQQHHHQQQQQQQQQ------ 337
              ||           ..:|| |..|.||       |.|..:         ::.:.|:.:
plant   279 NLSP-----------EVTQLDLHRLFYT-------LGAGVI---------EEVRVQRDKGFGFVR 316

  Fly   338 --QQQQQVVAAQQQHQQQQSLAQVVAAAAGAAP-----GLLPLANPAPPATPSLLQFAAGQSNAA 395
              ...:..:|.|..:.|....::.:..:.|..|     ...||..|||.:.|||
plant   317 YNTHDEAALAIQMGNAQPFLFSRQIRCSWGNKPTPSGTASNPLPPPAPASVPSL----------- 370

  Fly   396 LANSLYADAAAVVGYKRLLAAAAVSSGLRAPTTALGALQAAAANVPAAAAAAQLQQAQLRQNAAL 460
                   .|..::.|:|.||.|      :....|..:|:.|...|..|...|.:..... ||  :
plant   371 -------SAMDLLAYERQLALA------KMHPQAQHSLRQAGLGVNVAGGTAAMYDGGY-QN--V 419

  Fly   461 AAAHYPL 467
            ||||..|
plant   420 AAAHQQL 426

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp6	NP_001097631.1	RRM1_MSI	30..105	CDD:409990	16/78 (21%)
		RRM2_MSI	119..192	CDD:240769	25/77 (32%)
UBP1A	NP_849806.1	RRM1_PUB1	65..135	CDD:410026	16/74 (22%)
		RRM2_PUB1	147..230	CDD:410031	26/95 (27%)
		RRM_SF	273..349	CDD:473069	15/102 (15%)