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Protein Alignment Rbp6 and AT5G53720
DIOPT Version :10
| Sequence 1: | NP_001097631.1 |
Gene: | Rbp6 / 39919 |
FlyBaseID: | FBgn0260943 |
Length: | 499 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_200183.1 |
Gene: | AT5G53720 / 835453 |
AraportID: | AT5G53720 |
Length: | 100 |
Species: | Arabidopsis thaliana |
| Alignment Length: | 82 |
Identity: | 35/82 - (42%) |
| Similarity: | 50/82 - (60%) |
Gaps: | 1/82 - (1%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 25 PND-PGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLT 88
||| ..|:::.||.|.|..|.|..||.|:|:|..|.|:.|..|:||:|||||||.:..|..:...
plant 4 PNDRETKIYVAGLPWITRTEGLISYFERFGEIVYAKVVCDGATQRSKGFGFVTFREVESATRACE 68
Fly 89 QGTHELDGKKVDPKVAF 105
...|.:||:.|:.|:|:
plant 69 NPNHTIDGRTVNCKLAY 85
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| Rbp6 | NP_001097631.1 |
RRM1_MSI |
30..105 |
CDD:409990 |
31/74 (42%) |
| RRM2_MSI |
119..192 |
CDD:240769 |
|
| AT5G53720 | NP_200183.1 |
RRM_SF |
9..84 |
CDD:473069 |
31/74 (42%) |
|
Blue background indicates that the domain is not in
the aligned region.
|
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