DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbp6 and AT5G06210

DIOPT Version :10

Sequence 1:NP_001097631.1 Gene:Rbp6 / 39919 FlyBaseID:FBgn0260943 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_196239.1 Gene:AT5G06210 / 830508 AraportID:AT5G06210 Length:146 Species:Arabidopsis thaliana


Alignment Length:126 Identity:37/126 - (29%)
Similarity:62/126 - (49%) Gaps:20/126 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHEL 94
            |:||||||:.|:.:.|.:.|.:.|.:.||.::.|..:.||:|||||||:..:...|.|.    |.
plant    35 KLFIGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASADEAQKALM----EF 95

  Fly    95 DGKKVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQT 155
            :|::::.:..|...|      :.|:...||...|...          ||.:.|::...:.|
plant    96 NGQQLNGRTIFVDYA------KAKQSLGGGGGYPIAR----------GPPDPAVIAATRTT 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbp6NP_001097631.1 RRM1_MSI 30..105 CDD:409990 27/74 (36%)
RRM2_MSI 119..192 CDD:240769 7/37 (19%)
AT5G06210NP_196239.1 RRM_SF 34..113 CDD:473069 29/87 (33%)

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