Protein Alignment Rbp6 and CP33

DIOPT Version :10

• Sequence 1: NP_001097631.1
• Gene: Rbp6 / 39919
• FlyBaseID: FBgn0260943
• Length: 499
• Species: Drosophila melanogaster
• Sequence 2: NP_190806.1
• Gene: CP33 / 824403
• AraportID: AT3G52380
• Length: 329
• Species: Arabidopsis thaliana
• Alignment Length: 211
• Identity: 53/211 - (25%)
• Similarity: 96/211 - (45%)
• Gaps: 29/211 - (13%)

  Fly     4 KIEQQQQQQQVELGPCSPSEVPNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRR 68
            ::|:::|..|..          .:.|::::|.|.:..:...|...||..|.:.:..::.|..|.|
plant   101 EVEEEKQTTQAS----------GEEGRLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDR 155

  Fly    69 SRGFGFVTFSDPNSVDKVLTQ-GTHELDGKKVDPKVAFPR--RAHPKMVTRTK------------ 118
            ||||||||........:.:.. .:.::.|:.|  ||.||.  |.....|.|||
plant   156 SRGFGFVTMGSIEEAKEAMQMFNSSQIGGRTV--KVNFPEVPRGGENEVMRTKIRDNNRSYVDSP 218

  Fly   119 -KIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQS-EDVVDKVCEIHFH 181
             |::.|.|....|.:.:|..|.....:..|.:::::.|.|.|||||::|:| |:|...:..::..
plant   219 HKVYAGNLGWNLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGV 283

  Fly   182 EINNKMVECKKAQPKE 197
            |:..:.:....|..:|
plant   284 EVEGRALRLNLASERE 299

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp6	NP_001097631.1	RRM1_MSI	30..105	CDD:409990	21/75 (28%)
		RRM2_MSI	119..192	CDD:240769	19/73 (26%)
CP33	NP_190806.1	RRM_SF	117..196	CDD:473069	23/80 (29%)
		RRM2_NsCP33_like	220..295	CDD:410187	19/74 (26%)