Protein Alignment Rbp6 and RBP47B

DIOPT Version :10

• Sequence 1: NP_001097631.1
• Gene: Rbp6 / 39919
• FlyBaseID: FBgn0260943
• Length: 499
• Species: Drosophila melanogaster
• Sequence 2: NP_188544.1
• Gene: RBP47B / 821447
• AraportID: AT3G19130
• Length: 435
• Species: Arabidopsis thaliana
• Alignment Length: 244
• Identity: 59/244 - (24%)
• Similarity: 105/244 - (43%)
• Gaps: 31/244 - (12%)

  Fly     7 QQQQQQQVELGPCSPSEVPNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRG 71
            |.||.:.::.|.      .:|...:::|.|........|...|...|::|...|:::..|.:|.|
plant    92 QHQQHKAIDRGS------GDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEG 150

  Fly    72 FGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKK----------IFVGGLS 126
            :|||.|....:.::||    ....| .|.|....|.|.:....:..:|          :|||.||
plant   151 YGFVEFLSRAAAEEVL----QNYSG-SVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLS 210

  Fly   127 APTTLEDV---KSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDK-VCEIHFHEINNKM 187
            ...|  ||   :::.:::..::.|.::.|..|.|.:|:|||.|..|:...: :.|::....:|:.
plant   211 PDVT--DVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQ 273

  Fly   188 VECKKAQPKEVML----PANLAKTRAAGRSAYGELVVWGSSHAHSTAAT 232
            :....|.||..:.    .::.|...|.|..:.|.:.....|...||.||
plant   274 MRVGIATPKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTNAT 322

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp6	NP_001097631.1	RRM1_MSI	30..105	CDD:409990	19/74 (26%)
		RRM2_MSI	119..192	CDD:240769	21/86 (24%)
RBP47B	NP_188544.1	RRM1_SECp43_like	109..189	CDD:409780	21/84 (25%)
		RRM2_SECp43_like	201..280	CDD:409781	20/80 (25%)
		RRM_SF	320..391	CDD:473069	2/3 (67%)