Protein Alignment Rbp6 and SCL30A

DIOPT Version :10

• Sequence 1: NP_001097631.1
• Gene: Rbp6 / 39919
• FlyBaseID: FBgn0260943
• Length: 499
• Species: Drosophila melanogaster
• Sequence 2: NP_187966.1
• Gene: SCL30A / 820559
• AraportID: AT3G13570
• Length: 262
• Species: Arabidopsis thaliana
• Alignment Length: 247
• Identity: 53/247 - (21%)
• Similarity: 80/247 - (32%)
• Gaps: 55/247 - (22%)

  Fly    96 GKKVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRG 160
            |:...|:..|.......:.|   .:.|..|......||::..||||||::|..|..|..|...||
plant    18 GRSPSPRGRFGGSRDSDLPT---SLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRG 79

  Fly   161 FGFVTFQSEDVVDKVCEIH--------FHEINNKMVECKKAQPKEVMLPANLAKTRAAGRSAYGE 217
            |||:.|.  |..|.....|        ..|:.....|..:.:|.|:       :||..|
plant    80 FGFIQFM--DPADAAEAKHQMDGYLLLGRELTVVFAEENRKKPTEM-------RTRDRG------ 129

  Fly   218 LVVWGSSHAHSTAATSAAAAGLLPSSLAAAASVLQQQ---QQQQQQQQQQQQQQQQHHQQLHHTH 279
                |.|:.......|.......|.......|..:.:   ....::.|.:....|....:...::
plant   130 ----GRSNRFQDRRRSPPRYSRSPPPRRGRRSRSRSRGYNSPPAKRHQSRSVSPQDRRYEKERSY 190

  Fly   280 PQSPAH--------------SHAHHPHTHSHSQLLGSLRYTP------YPLP 311
            .:||.|              ||:..|......:...|  |||      .|:|
plant   191 SRSPPHNGSRVRSGSPGRVKSHSRSPRRSVSPRKNRS--YTPEQARSQSPVP 240

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp6	NP_001097631.1	RRM1_MSI	30..105	CDD:409990	2/8 (25%)
		RRM2_MSI	119..192	CDD:240769	25/80 (31%)
SCL30A	NP_187966.1	RRM_SF	37..120	CDD:473069	26/87 (30%)
		PABP-1234	<39..252	CDD:130689	49/223 (22%)