Protein Alignment Rbp6 and U11/U12-31K

DIOPT Version :10

• Sequence 1: NP_001097631.1
• Gene: Rbp6 / 39919
• FlyBaseID: FBgn0260943
• Length: 499
• Species: Drosophila melanogaster
• Sequence 2: NP_187651.1
• Gene: U11/U12-31K / 820203
• AraportID: AT3G10400
• Length: 261
• Species: Arabidopsis thaliana
• Alignment Length: 284
• Identity: 48/284 - (16%)
• Similarity: 95/284 - (33%)
• Gaps: 102/284 - (35%)

  Fly    18 PCSPSEVPNDPGK-----------------MFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPT 65
            |.:|...|:...|                 :::..|.:..:...:...|..:|.::...|:||..
plant    29 PSNPKHQPSSSAKSSAPGGGSGGLAPSKSTLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRH 93

  Fly    66 TRRSRGFGFVTF-SDPNSVDKVLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPT 129
            ||:|||..||.: |..::.....:.....|:|:|:...:|.......:.:  .|:::
plant    94 TRQSRGVAFVLYVSREDAAKAARSMDAKILNGRKLTVSIAADNGRASEFI--KKRVY-------- 148

  Fly   130 TLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQ 194
                           :|....::.....|..:                           ||.|.|
plant   149 ---------------KDKSRCYECGDEGHLSY---------------------------ECPKNQ 171

  Fly   195 --PKEVMLPANLAKTRAAGRSAYGEL--VVWGSSHAHSTAATSAAAAGLLPSSLAAA-------- 247
              |:|...|   .|.|...:...||.  :.|           ||||     .|||.|
plant   172 LGPRERPPP---PKKRGRRKEEEGEAEEISW-----------SAAA-----PSLAVAEEEFEEEN 217

  Fly   248 -ASVLQQQQQQQQQQQQQQQQQQQ 270
             |||:..:..::.::::.::::::
plant   218 WASVVDNEAGERLRKREAEEEEER 241

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp6	NP_001097631.1	RRM1_MSI	30..105	CDD:409990	18/92 (20%)
		RRM2_MSI	119..192	CDD:240769	4/72 (6%)
U11/U12-31K	NP_187651.1	RRM_ZCRB1	56..131	CDD:409827	17/74 (23%)
		PTZ00368	154..>173	CDD:173561	5/45 (11%)