Protein Alignment Rbp6 and AT2G41060

DIOPT Version :10

• Sequence 1: NP_001097631.1
• Gene: Rbp6 / 39919
• FlyBaseID: FBgn0260943
• Length: 499
• Species: Drosophila melanogaster
• Sequence 2: NP_181639.1
• Gene: AT2G41060 / 818705
• AraportID: AT2G41060
• Length: 451
• Species: Arabidopsis thaliana
• Alignment Length: 246
• Identity: 63/246 - (25%)
• Similarity: 106/246 - (43%)
• Gaps: 27/246 - (10%)

  Fly    30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHEL 94
            |:|:.||.|.|..:||.|.|.:||:|.:...:.|..:.:|:|:||:.|...:.....|.|...::
plant   129 KIFVHGLGWDTKADSLIDAFKQYGEIEDCKCVVDKVSGQSKGYGFILFKSRSGARNALKQPQKKI 193

  Fly    95 DGKKV------------DPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDA 147
            ..:..            :|.||..:..:|:.|.|  ||:|..:||....:.:..:|.:||.||:.
plant   194 GTRMTACQLASIGPVQGNPVVAPAQHFNPENVQR--KIYVSNVSADIDPQKLLEFFSRFGEIEEG 256

  Fly   148 MLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQ--PKEVMLPAN------- 203
            .|..||.|.|.:||....::|.:...|..|.........::.|.||.  ||:|....:
plant   257 PLGLDKATGRPKGFALFVYRSLESAKKALEEPHKTFEGHVLHCHKANDGPKQVKQHQHNHNSHNQ 321

  Fly   204 LAKTRAAGRSAYGELVVWGSSHAHSTAATSAAAAGLLPSSLAAAASVLQQQ 254
            .::.:....:.||.    ...|.|..|..:.|.....|:...|..::|..|
plant   322 NSRYQRNDNNGYGA----PGGHGHFIAGNNQAVQAFNPAIGQALTALLASQ 368

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp6	NP_001097631.1	RRM1_MSI	30..105	CDD:409990	23/86 (27%)
		RRM2_MSI	119..192	CDD:240769	21/72 (29%)
AT2G41060	NP_181639.1	RRM_SF	128..203	CDD:473069	21/73 (29%)
		PABP-1234	<130..441	CDD:130689	62/245 (25%)
		RRM	228..299	CDD:214636	20/70 (29%)