Protein Alignment Rbp6 and UBA1A

DIOPT Version :10

• Sequence 1: NP_001097631.1
• Gene: Rbp6 / 39919
• FlyBaseID: FBgn0260943
• Length: 499
• Species: Drosophila melanogaster
• Sequence 2: NP_850021.1
• Gene: UBA1A / 816744
• AraportID: AT2G22090
• Length: 347
• Species: Arabidopsis thaliana
• Alignment Length: 490
• Identity: 107/490 - (21%)
• Similarity: 152/490 - (31%)
• Gaps: 188/490 - (38%)

  Fly     4 KIEQQQQQQQVELGPCSPSEVPNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRR 68
            ||.:||||.:... |.|.|...:|........   :..||.||:....|
plant    26 KINKQQQQPESST-PYSSSSSSSDSSDSESDN---EFDPEELRELLQPY---------------- 70

  Fly    69 SRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLED 133
                     |....||.|.:...   .|..:...|.   .|..:.||. :||||.||...||.|.
plant    71 ---------SKDQLVDLVCSASR---IGSSIYSAVV---EAADRDVTH-RKIFVYGLPWETTRET 119

  Fly   134 VKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKEV 198
            :...||.:|.||:..::.||.|.:.:|||||.|::                      :|...:.:
plant   120 LVGVFEGYGEIEECTVVIDKATGKAKGFGFVMFKT----------------------RKGAKEAL 162

  Fly   199 MLPANLAKTRAAGRSAYGELVVWGSSHAHSTAATSAAAAGLLPSSLAAAASVLQQQQQQQQQQQQ 263
            ..|    |.|...|:|..:|           |:...||:|
plant   163 KEP----KKRILNRTATCQL-----------ASMGPAASG------------------------- 187

  Fly   264 QQQQQQQHHQQLHHTHPQSPAHSHAHHPHTHSHSQLLGSLRYTPYPLPAHLSAAAVVVAQQQHHH 328
                                          ..|.|          |.|..:|..::.      :|
plant   188 ------------------------------KGHDQ----------PGPVKISMGSMA------NH 206

  Fly   329 QQQQQQQQQQQQQQVVAAQQQHQQQQSLAQVVAAAAGAAPGLLPLANPAPPATPSLLQFAAGQ-S 392
            .|.||||          .|.||         |....|.|.....|.|...|.      :.||. .
plant   207 GQPQQQQ----------VQGQH---------VFNGGGMAASPFMLGNQYHPL------YGAGMLG 246

  Fly   393 NAALANSLYADAAAVVGYKRLLAAAAVSSGLRAPTTALGALQAAAANV------PAAAAAAQLQQ 451
            |.|||    |.|||..||...:.|.|::.|      .||:....::.:      |:..||.....
plant   247 NPALA----AAAAAGGGYMYPMLAGALAHG------GLGSDMVQSSQMGGIGVDPSVGAAGLSAL 301

  Fly   452 AQLRQNAALAAAHYPLSELLAMQG-GMEMGAGANS 485
            ....:..:|.:. ||.|:....:| |.:..||.:|
plant   302 GSYFRGQSLPST-YPDSDAGGKRGTGKDSDAGGSS 335

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp6	NP_001097631.1	RRM1_MSI	30..105	CDD:409990	11/74 (15%)
		RRM2_MSI	119..192	CDD:240769	23/72 (32%)
UBA1A	NP_850021.1	RRM_SF	104..179	CDD:473069	30/111 (27%)