Protein Alignment Rbp6 and Msi2

DIOPT Version :9

• Sequence 1: NP_001097631.1
• Gene: Rbp6 / 39919
• FlyBaseID: FBgn0260943
• Length: 499
• Species: Drosophila melanogaster
• Sequence 2: XP_006534494.1
• Gene: Msi2 / 76626
• MGIID: 1923876
• Length: 378
• Species: Mus musculus
• Alignment Length: 329
• Identity: 171/329 - (51%)
• Similarity: 197/329 - (59%)
• Gaps: 77/329 - (23%)

  Fly    20 SPSEVPNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVD 84
            |.::..:||||||||||||||||:||||||.::|:|.|.|||:||||:||||||||||:||.|||
Mouse    12 SANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVD 76

  Fly    85 KVLTQGTHELDGKKVDPKVAFPRRAHPK------------------------MVTRTKKIFVGGL 125
            |||.|..||||.|.:||||||||||.||                        |||||||||||||
Mouse    77 KVLGQPHHELDSKTIDPKVAFPRRAQPKSQEQGGSWKRTWTTVQARAASGDQMVTRTKKIFVGGL 141

  Fly   126 SAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVEC 190
            ||.|.:||||.||||||.:|||||||||.||||||||||||::||||:|||||||||||||||||
Mouse   142 SANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVEC 206

  Fly   191 KKAQPKEVMLPANLAKTRAAGRS---------------AYGELV-VWGSSH-------------- 225
            |||||||||.|..   ||...|.               .|...| .:|..:
Mouse   207 KKAQPKEVMFPPG---TRGRARGLPYTMDAFMLGMGMLGYPNFVATYGRGYPGFAPSYGYQFPAL 268

  Fly   226 -AHSTAATSAAAAGLLPSSLAAAA--SVLQQQQQQQQQQQQQQQQQQQHHQQLHHTHPQSPAHSH 287
             .:..|:..|||.|.:.::..|||  |||                 ..:..|.:...|.|||.|:
Mouse   269 LPYLNASFPAAAYGPVAAAAVAAARGSVL-----------------NSYSAQPNFGAPASPAGSN 316

  Fly   288 AHHP 291
            ...|
Mouse   317 PARP 320

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp6	NP_001097631.1	RRM1_MSI	31..105	CDD:241020	56/73 (77%)
		RRM2_MSI	119..192	CDD:240769	62/72 (86%)
Msi2	XP_006534494.1	RRM1_MSI	23..97	CDD:241020	56/73 (77%)
		PABP-1234	<35..363	CDD:130689	154/306 (50%)
		RRM2_MSI	135..208	CDD:240769	62/72 (86%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C167835953
Domainoid	1	1.000	124	1.000	Domainoid score	I5498
eggNOG	1	0.900	-	-		E1_KOG4205
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H62199
Inparanoid	1	1.050	367	1.000	Inparanoid score	I2137
Isobase	1	0.950	-	0	Normalized mean entropy	S972
OMA	1	1.010	-	-		QHG47546
OrthoDB	1	1.010	-	-		D1565323at2759
OrthoFinder	1	1.000	-	-		FOG0000417
OrthoInspector	1	1.000	-	-		otm44313
orthoMCL	1	0.900	-	-		OOG6_101082
Panther	1	1.100	-	-	LDO	PTHR48032
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1869
SonicParanoid	1	1.000	-	-		X310
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	16	15.790