DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbp6 and Rbm31y

DIOPT Version :10

Sequence 1:NP_001097631.1 Gene:Rbp6 / 39919 FlyBaseID:FBgn0260943 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_083246.1 Gene:Rbm31y / 74484 MGIID:1921734 Length:565 Species:Mus musculus


Alignment Length:253 Identity:89/253 - (35%)
Similarity:126/253 - (49%) Gaps:30/253 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 IKIEQQQQQQQVELG-PCSPSEVPNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTT 66
            :.:|:..:.:|...| ....::...|..||||||||.:.|.:.|.:|..::|:|.:.::..||.|
Mouse     6 LAVEKDNETEQFREGFKIDATKNQQDASKMFIGGLSQEMSKQVLLEYLSKFGEIIDFIIKTDPNT 70

  Fly    67 RRSRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVA------FPRRAHPKMVTRTKKIFVGGL 125
            ..|||||||.|.|..:|:|||....|::||||::.|.|      ||          .||||||||
Mouse    71 GLSRGFGFVLFKDSATVEKVLQVKDHKVDGKKIEFKRAKALESQFP----------NKKIFVGGL 125

  Fly   126 SAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVEC 190
            :...:.|.:::||..||.||...|.....|...|.|||:.:..|:.|.||.|..:|.|.:...|.
Mouse   126 NPRLSEEKIRAYFGTFGQIEAIELPLCSDTRERRAFGFIKYMDENSVRKVLENRYHFIGSSRCEV 190

  Fly   191 KKAQPKEVMLPA-NLAKTRAAGRSAYGELVV-------W---GSSHAHSTAATSAAAA 237
            |.|.|||  .|| .|:|.:|..:....:.|.       |   ||...|..|.:.|..|
Mouse   191 KMAYPKE--NPARQLSKRKAIAKDRTRKSVPAVELENNWRGGGSPSFHIMANSEAQEA 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbp6NP_001097631.1 RRM1_MSI 30..105 CDD:409990 36/80 (45%)
RRM2_MSI 119..192 CDD:240769 28/72 (39%)
Rbm31yNP_083246.1 RRM_SF 34..109 CDD:473069 35/74 (47%)
RRM_SF 119..193 CDD:473069 29/73 (40%)

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