DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Rbp6 and hnrnpab

DIOPT Version :9

Sequence 1:	NP_001097631.1	Gene:	Rbp6 / 39919	FlyBaseID:	FBgn0260943	Length:	499	Species:	Drosophila melanogaster
Sequence 2:	XP_012814656.1	Gene:	hnrnpab / 734098	XenbaseID:	XB-GENE-6042555	Length:	326	Species:	Xenopus tropicalis

Alignment Length:	230	Identity:	93/230 - (40%)
Similarity:	122/230 - (53%)	Gaps:	45/230 - (19%)

- Green bases have known domain annotations that are detailed below.

  Fly     9 QQQQQVELG----------PCSPSEVP-----------------NDPG-------------KMFI 33
            :|||.:|.|          ..:.|:||                 .|.|             |||:
Frog     5 EQQQYMETGTENGHEACDAEAAESKVPGGQNGAEGDQINASKGEEDAGCVPDISSPLTEGVKMFV 69

  Fly    34 GGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHELDGKK 98
            |||||.||.:.|:|||.::|::|:..:..||.|.|||||||:.|.|..||||||.|..|.|||:.
Frog    70 GGLSWDTSKKDLKDYFSKFGEVSDCTIKMDPNTGRSRGFGFILFKDAASVDKVLEQKEHRLDGRL 134

  Fly    99 VDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGF 163
            :|||.|...:..|     .||||||||:.....:.::.|||.||.||...|..|.:||:.|||.|
Frog   135 IDPKKAMAMKKDP-----IKKIFVGGLNPEAGEDKIREYFETFGEIEAIELPMDPKTNKRRGFVF 194

  Fly   164 VTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKEV 198
            :||:.|:.|.|:.|..||.::....|.|.||||||
Frog   195 ITFKEEEPVKKILEKKFHNVSGSKCEIKIAQPKEV 229

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rbp6	NP_001097631.1	RRM1_MSI	31..105	CDD:241020	41/73 (56%)
Rbp6	NP_001097631.1	RRM2_MSI	119..192	CDD:240769	31/72 (43%)
hnrnpab	XP_012814656.1	CBFNT	1..52	CDD:311868	9/46 (20%)
		RRM1_hnRNPAB	66..140	CDD:241201	42/73 (58%)
		RRM2_hnRNPAB	145..224	CDD:241028	34/83 (41%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910