DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbp6 and Dazap1

DIOPT Version :10

Sequence 1:NP_001097631.1 Gene:Rbp6 / 39919 FlyBaseID:FBgn0260943 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_001365924.1 Gene:Dazap1 / 70248 MGIID:1917498 Length:407 Species:Mus musculus


Alignment Length:216 Identity:85/216 - (39%)
Similarity:128/216 - (59%) Gaps:24/216 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 GKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHE 93
            ||:|:|||.|.|:.|:||.||.:||::.:.::|||.||.:|||||||.|.|||.|..||....|.
Mouse    10 GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHT 74

  Fly    94 LDGKKVDPKVAFPRRAHPKMV--------------TRTKKIFVGGLSAPTTLEDVKSYFEQFGPI 144
            |||:.:|||...||...|:..              :::.||||||:.......:::.||::||.:
Mouse    75 LDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVV 139

  Fly   145 EDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKEVMLPANLAKTRA 209
            .:.::::|.:..|.|||||:||:.|..||:...:|||:|..|.||.|:|:|::       :|.:|
Mouse   140 TEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRD-------SKNQA 197

  Fly   210 AGRSAYGELVVWGSSHAHSTA 230
            .|:....:   |||..|.|.|
Mouse   198 PGQPGASQ---WGSRVAPSAA 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbp6NP_001097631.1 RRM1_MSI 30..105 CDD:409990 40/74 (54%)
RRM2_MSI 119..192 CDD:240769 29/72 (40%)
Dazap1NP_001365924.1 RRM1_DAZAP1 11..92 CDD:409988 42/80 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 74..117 11/42 (26%)
RRM2_DAZAP1 111..190 CDD:409765 31/78 (40%)

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