DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbp6 and DAZ4

DIOPT Version :10

Sequence 1:NP_001097631.1 Gene:Rbp6 / 39919 FlyBaseID:FBgn0260943 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_001375413.1 Gene:DAZ4 / 57135 HGNCID:15966 Length:723 Species:Homo sapiens


Alignment Length:577 Identity:121/577 - (20%)
Similarity:184/577 - (31%) Gaps:180/577 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 PGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTH 92
            |..:|:||:..:.....:...|||||.:.|..::.: .|..|:|:|||:|.:...|.|::....|
Human    39 PNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITN-RTGVSKGYGFVSFVNDVDVQKIVGSQIH 102

  Fly    93 ELDGKKVD------------------PKVAFP--------------------------------- 106
             ..|||:.                  |.|..|                                 
Human   103 -FHGKKLKLGPAIRKQKLCARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQ 166

  Fly   107 RRAHP-----------------------------KMVTRTKKIFVGGLSAPTTLEDVKSYFEQFG 142
            ..|:|                             |:|..|  :||||:.|.....::.|.|.::|
Human   167 SAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNT--VFVGGIDARMDETEIGSCFGRYG 229

  Fly   143 PIEDAMLMFDKQTNR---HRGFGFVTFQSEDVVDKV--CEIHFHEINNKMVECKKAQPKEVMLPA 202
            .:::..::    |||   .:|:|||:|.::..|.|:  .:||||             .|::.|..
Human   230 SVKEVKII----TNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFH-------------GKKLKLGP 277

  Fly   203 NLAKTRAAGRSAYGELVVWGSSHAHSTAATSAAAAGLLPSSLAAAASVLQQQQQQQQQQQQQQQQ 267
            .:.|.:...|......:|                  :.|.......:|.:....:...|.|....
Human   278 AIRKQKLCARHVQPRPLV------------------VNPPPPPQFQNVWRNPNTETYLQPQITPN 324

  Fly   268 QQQHHQQLHHTHPQSPAHSHAHHPHTHSHSQLLGSLRYTPYPLPAHLSAAAVVVAQQQHHHQQQQ 332
            ....|.|.:..:|.||.       ...:..||| ...|..||.... ||..|....|...:..|.
Human   325 PVTQHVQAYSAYPHSPG-------QVITGCQLL-VYNYQEYPTYPD-SAFQVTTGYQLPVYNYQP 380

  Fly   333 QQQQQQQQQQVVAAQQ-QHQQQQSLAQVVAAAAGAAPGL-LPLAN----PAPPATPSLLQFAAG- 390
            .....:...||.|..| .....|:......:....|.|. .|:.|    ||.|::|  .|..|| 
Human   381 FPAYPRSPFQVTAGYQLPVYNYQAFPAYPNSPFQVATGYQFPVYNYQPFPAYPSSP--FQVTAGY 443

  Fly   391 -------QSNAALANSLYADAAA----VVGYKRLLA----AAAVSSGLRAPTTALGALQAAAANV 440
                   |:..|..||.:..|..    |..|:...|    ...|::|.:.|.....|. .|..|.
Human   444 QLPVYNYQAFPAYPNSPFQVATGYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAF-PAYPNS 507

  Fly   441 PAAAAAAQLQQAQLRQNAALAAAHYPLSELLAMQGGMEMGAGANSAAAAAASLYQLP 497
            |...|..  .|..:....|..|  ||.|.:....|                  ||||
Human   508 PFQVATG--YQFPVYNYQAFPA--YPNSPVQVTTG------------------YQLP 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbp6NP_001097631.1 RRM1_MSI 30..105 CDD:409990 24/92 (26%)
RRM2_MSI 119..192 CDD:240769 22/77 (29%)
DAZ4NP_001375413.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27
RRM_DAZL 35..116 CDD:410073 23/78 (29%)
PABP-1234 42..412 CDD:130689 82/417 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 163..192 2/28 (7%)
RRM_DAZL 200..281 CDD:410073 27/99 (27%)
Daz 407..427 CDD:465893 4/19 (21%)
Daz 431..451 CDD:465893 6/21 (29%)
Daz 455..475 CDD:465893 5/19 (26%)
Daz 479..499 CDD:465893 4/19 (21%)
Daz 503..523 CDD:465893 5/21 (24%)
Daz 527..547 CDD:465893 9/36 (25%)
Daz 551..571 CDD:465893
Daz 575..595 CDD:465893
Daz 599..619 CDD:465893
Daz 623..643 CDD:465893
Daz 647..667 CDD:465893
Daz 671..691 CDD:465893
Blue background indicates that the domain is not in the aligned region.

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