Protein Alignment Rbp6 and rbm24b

DIOPT Version :10

• Sequence 1: NP_001097631.1
• Gene: Rbp6 / 39919
• FlyBaseID: FBgn0260943
• Length: 499
• Species: Drosophila melanogaster
• Sequence 2: NP_001315070.1
• Gene: rbm24b / 562236
• ZFINID: ZDB-GENE-060312-43
• Length: 245
• Species: Danio rerio
• Alignment Length: 268
• Identity: 70/268 - (26%)
• Similarity: 111/268 - (41%)
• Gaps: 70/268 - (26%)

  Fly    30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHEL 94
            |:|:|||.:.|:..|||.||..:|:|.||:|:.|..|.:|||:||||.:|.::.::........:
Zfish    12 KIFVGGLPYHTTDSSLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRSAAERACKDPNPII 76

  Fly    95 DGKKVDPKVAF----PRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIED--AMLMFD- 152
            ||:|.:..:|:    ||...|.......:|.      ||.|:      ..:|..||  :.|::.
Zfish    77 DGRKANVNLAYLGAKPRILQPGFSFGVPQIH------PTFLQ------RPYGDSEDDHSPLLYPP 129

  Fly   153 --KQTNR---HRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKEVMLP------ANLAK 206
              :|..|   |..:.....|...|:..             |:...:.|.....|      |..|:
Zfish   130 PFRQVMRIPAHYVYPQAFVQPSVVIPH-------------VQASSSSPAAAATPYLDYSSAAYAQ 181

  Fly   207 --TRAAGRSAYGELVVWGSSHAHSTAATSAAAAGLL----------------PSSLAAAASVLQQ 253
              |.||..:||.:         :..||:.||.||.:                |:..|.||:..|.
Zfish   182 YTTAAAAAAAYEQ---------YPYAASPAATAGYVTTAGTGYGYMQQPLASPAPAATAATFGQY 237

  Fly   254 QQQQQQQQ 261
            |.|.::.|
Zfish   238 QTQTERMQ 245

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp6	NP_001097631.1	RRM1_MSI	30..105	CDD:409990	29/74 (39%)
		RRM2_MSI	119..192	CDD:240769	14/80 (18%)
rbm24b	NP_001315070.1	RRM_RBM24_RBM38_like	11..86	CDD:409818	29/73 (40%)
		PABP-1234	<23..>158	CDD:130689	40/159 (25%)