Protein Alignment Rbp6 and Rbm38

DIOPT Version :10

• Sequence 1: NP_001097631.1
• Gene: Rbp6 / 39919
• FlyBaseID: FBgn0260943
• Length: 499
• Species: Drosophila melanogaster
• Sequence 2: NP_062420.2
• Gene: Rbm38 / 56190
• MGIID: 1889294
• Length: 237
• Species: Mus musculus
• Alignment Length: 287
• Identity: 66/287 - (22%)
• Similarity: 102/287 - (35%)
• Gaps: 97/287 - (33%)

  Fly    19 CSPSEVPNDPG---------------KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRR 68
            ||||..|....               |:|:|||.:.|:..|||.||..:|||.||:|:.|..|.:
Mouse     7 CSPSVFPRPSAAPSAMHGSQKDTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGK 71

  Fly    69 SRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAF----PR-----------RAHPKMVTRT- 117
            |||:||||.:|..:.|:........:||:|.:..:|:    ||           :.||.::.||
Mouse    72 SRGYGFVTMADRAAADRACKDPNPIIDGRKANVNLAYLGAKPRSLQTGFAVGVQQLHPTLIQRTY 136

  Fly   118 ----KKIFVGGLSAP------TTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVV 172
                ..|:...:..|      |.:..:.|.:.::.|...|...:...|.....:
Mouse   137 GLTPHYIYPPAIVQPSVVIPATPVPSLSSPYLEYTPASPAYAQYPPATYDQYPY----------- 190

  Fly   173 DKVCEIHFHEINNKMVECKKAQPKEVMLPANLAKTRAAGRSAYGELVVWGSSHAHSTAATSAAAA 237
                                                ||..:|....|.:|...|...|.::||.|
Mouse   191 ------------------------------------AASPAAATSFVGYGYPAAVPQALSAAAPA 219

  Fly   238 GLLPSSLAAAASVLQQQQQQQQQQQQQ 264
            |         .:.:|.|..|.|..:.|
Mouse   220 G---------TTFVQYQAPQLQPDRMQ 237

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp6	NP_001097631.1	RRM1_MSI	30..105	CDD:409990	31/74 (42%)
		RRM2_MSI	119..192	CDD:240769	7/78 (9%)
Rbm38	NP_062420.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..24		5/16 (31%)
		RRM_RBM24_RBM38_like	32..107	CDD:409818	31/74 (42%)
		PABP-1234	<44..>182	CDD:130689	38/137 (28%)