DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbp6 and Hnrnpa2b1

DIOPT Version :10

Sequence 1:NP_001097631.1 Gene:Rbp6 / 39919 FlyBaseID:FBgn0260943 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_001361674.1 Gene:Hnrnpa2b1 / 53379 MGIID:104819 Length:353 Species:Mus musculus


Alignment Length:190 Identity:75/190 - (39%)
Similarity:116/190 - (61%) Gaps:2/190 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHEL 94
            |:||||||::|:.||||:|:.::|.:::.:||:||.::|||||||||||....||..:....|.:
Mouse    22 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSI 86

  Fly    95 DGKKVDPKVAFPRR--AHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNR 157
            ||:.|:||.|..|.  ..|......||:||||:...|....::.|||::|.|:...::.|:|:.:
Mouse    87 DGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGK 151

  Fly   158 HRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKEVMLPANLAKTRAAGRSAYGE 217
            .||||||||...|.|||:....:|.||....|.:||..::.|.....:::...|...:|:
Mouse   152 KRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQSSRSGRGGNFGFGD 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbp6NP_001097631.1 RRM1_MSI 30..105 CDD:409990 37/74 (50%)
RRM2_MSI 119..192 CDD:240769 29/72 (40%)
Hnrnpa2b1NP_001361674.1 Nuclear localization signal. /evidence=ECO:0000255 9..15
RRM1_hnRNPA2B1 19..99 CDD:410155 38/76 (50%)
RRM2_hnRNPA2B1 112..191 CDD:409995 32/78 (41%)
Disordered. /evidence=ECO:0000250|UniProtKB:P22626 193..353 3/19 (16%)
HnRNPA1 302..326 CDD:463312
Nuclear targeting sequence. /evidence=ECO:0000250 308..347
Blue background indicates that the domain is not in the aligned region.

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