Sequence 1: | NP_001097631.1 | Gene: | Rbp6 / 39919 | FlyBaseID: | FBgn0260943 | Length: | 499 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001011015.1 | Gene: | hnrnpdl / 496424 | XenbaseID: | XB-GENE-495016 | Length: | 297 | Species: | Xenopus tropicalis |
Alignment Length: | 211 | Identity: | 97/211 - (45%) |
---|---|---|---|
Similarity: | 116/211 - (54%) | Gaps: | 19/211 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 KIEQQQQQQQVELGPCSPSEVPNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRR 68
Fly 69 SRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLED 133
Fly 134 VKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKEV 198
Fly 199 MLPANLAKTRAAGRSA 214 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rbp6 | NP_001097631.1 | RRM1_MSI | 31..105 | CDD:241020 | 41/73 (56%) |
RRM2_MSI | 119..192 | CDD:240769 | 35/72 (49%) | ||
hnrnpdl | NP_001011015.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..21 | 2/5 (40%) | |
RRM1_hnRPDL | 27..102 | CDD:410152 | 43/78 (55%) | ||
RRM2_hnRPDL | 112..186 | CDD:409998 | 36/73 (49%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 192..224 | 4/16 (25%) | |||
Trnau1ap | 222..>278 | CDD:407550 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1565323at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |