DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbp6 and hnrnpdl

DIOPT Version :10

Sequence 1:NP_001097631.1 Gene:Rbp6 / 39919 FlyBaseID:FBgn0260943 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_001011015.1 Gene:hnrnpdl / 496424 XenbaseID:XB-GENE-495016 Length:297 Species:Xenopus tropicalis


Alignment Length:37 Identity:11/37 - (29%)
Similarity:14/37 - (37%) Gaps:9/37 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VSEDYKKAVEKCRRKLR---------GLIAEKNCAPI 35
            |..:|....||.|..||         |:|..|...|:
 Frog   260 VPNNYLVPTEKKRSALRWGVRCDLANGVIPRKLPFPL 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbp6NP_001097631.1 RRM1_MSI 30..105 CDD:409990 2/6 (33%)
RRM2_MSI 119..192 CDD:240769
hnrnpdlNP_001011015.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
RRM1_hnRPDL 27..102 CDD:410152
RRM2_hnRPDL 112..186 CDD:409998
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 192..224
Trnau1ap 223..>272 CDD:465438 4/11 (36%)
Blue background indicates that the domain is not in the aligned region.

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